Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28641 | 86146;86147;86148 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
N2AB | 27000 | 81223;81224;81225 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
N2A | 26073 | 78442;78443;78444 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
N2B | 19576 | 58951;58952;58953 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
Novex-1 | 19701 | 59326;59327;59328 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
Novex-2 | 19768 | 59527;59528;59529 | chr2:178560211;178560210;178560209 | chr2:179424938;179424937;179424936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.981 | N | 0.583 | 0.393 | None | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85825E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.079 | likely_benign | 0.0745 | benign | -0.512 | Destabilizing | 0.022 | N | 0.33 | neutral | N | 0.483670008 | None | None | N |
P/C | 0.3741 | ambiguous | 0.3028 | benign | -0.796 | Destabilizing | 0.999 | D | 0.655 | prob.neutral | None | None | None | None | N |
P/D | 0.2919 | likely_benign | 0.2526 | benign | -0.085 | Destabilizing | 0.971 | D | 0.531 | neutral | None | None | None | None | N |
P/E | 0.2063 | likely_benign | 0.1826 | benign | -0.166 | Destabilizing | 0.971 | D | 0.547 | neutral | None | None | None | None | N |
P/F | 0.3437 | ambiguous | 0.274 | benign | -0.565 | Destabilizing | 0.996 | D | 0.649 | prob.neutral | None | None | None | None | N |
P/G | 0.23 | likely_benign | 0.1991 | benign | -0.667 | Destabilizing | 0.825 | D | 0.455 | neutral | None | None | None | None | N |
P/H | 0.1476 | likely_benign | 0.1295 | benign | -0.094 | Destabilizing | 0.998 | D | 0.561 | neutral | N | 0.475008727 | None | None | N |
P/I | 0.2194 | likely_benign | 0.1789 | benign | -0.241 | Destabilizing | 0.971 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/K | 0.2046 | likely_benign | 0.1792 | benign | -0.456 | Destabilizing | 0.971 | D | 0.537 | neutral | None | None | None | None | N |
P/L | 0.0966 | likely_benign | 0.0866 | benign | -0.241 | Destabilizing | 0.961 | D | 0.624 | neutral | N | 0.461624505 | None | None | N |
P/M | 0.2305 | likely_benign | 0.1954 | benign | -0.478 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
P/N | 0.205 | likely_benign | 0.1748 | benign | -0.304 | Destabilizing | 0.971 | D | 0.621 | neutral | None | None | None | None | N |
P/Q | 0.1244 | likely_benign | 0.1133 | benign | -0.471 | Destabilizing | 0.985 | D | 0.485 | neutral | None | None | None | None | N |
P/R | 0.1523 | likely_benign | 0.1348 | benign | 0.012 | Stabilizing | 0.981 | D | 0.583 | neutral | N | 0.504218638 | None | None | N |
P/S | 0.0994 | likely_benign | 0.089 | benign | -0.727 | Destabilizing | 0.39 | N | 0.3 | neutral | N | 0.478762833 | None | None | N |
P/T | 0.0957 | likely_benign | 0.0845 | benign | -0.696 | Destabilizing | 0.78 | D | 0.57 | neutral | N | 0.499522108 | None | None | N |
P/V | 0.1452 | likely_benign | 0.1266 | benign | -0.297 | Destabilizing | 0.943 | D | 0.493 | neutral | None | None | None | None | N |
P/W | 0.5491 | ambiguous | 0.4558 | ambiguous | -0.64 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
P/Y | 0.3152 | likely_benign | 0.2493 | benign | -0.356 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.