Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28651 | 86176;86177;86178 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
N2AB | 27010 | 81253;81254;81255 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
N2A | 26083 | 78472;78473;78474 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
N2B | 19586 | 58981;58982;58983 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
Novex-1 | 19711 | 59356;59357;59358 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
Novex-2 | 19778 | 59557;59558;59559 | chr2:178560181;178560180;178560179 | chr2:179424908;179424907;179424906 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.775 | 0.442 | 0.753645140278 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2387 | likely_benign | 0.2091 | benign | -0.759 | Destabilizing | 0.998 | D | 0.69 | prob.delet. | None | None | None | None | I |
L/C | 0.4824 | ambiguous | 0.4452 | ambiguous | -0.689 | Destabilizing | 1.0 | D | 0.657 | prob.neutral | None | None | None | None | I |
L/D | 0.784 | likely_pathogenic | 0.7479 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
L/E | 0.3918 | ambiguous | 0.3475 | ambiguous | 0.039 | Stabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | I |
L/F | 0.2032 | likely_benign | 0.1897 | benign | -0.734 | Destabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | I |
L/G | 0.6403 | likely_pathogenic | 0.5891 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
L/H | 0.2629 | likely_benign | 0.2318 | benign | -0.205 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
L/I | 0.1066 | likely_benign | 0.0888 | benign | -0.423 | Destabilizing | 0.997 | D | 0.499 | neutral | N | 0.463758883 | None | None | I |
L/K | 0.2542 | likely_benign | 0.2191 | benign | -0.242 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | I |
L/M | 0.1469 | likely_benign | 0.1368 | benign | -0.379 | Destabilizing | 0.999 | D | 0.692 | prob.delet. | None | None | None | None | I |
L/N | 0.497 | ambiguous | 0.4427 | ambiguous | -0.054 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
L/P | 0.1256 | likely_benign | 0.1193 | benign | -0.501 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.341488607 | None | None | I |
L/Q | 0.1621 | likely_benign | 0.1396 | benign | -0.285 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.473245157 | None | None | I |
L/R | 0.2155 | likely_benign | 0.1818 | benign | 0.267 | Stabilizing | 0.999 | D | 0.797 | deleterious | N | 0.452080451 | None | None | I |
L/S | 0.2848 | likely_benign | 0.2462 | benign | -0.611 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
L/T | 0.2217 | likely_benign | 0.1825 | benign | -0.582 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
L/V | 0.1029 | likely_benign | 0.0876 | benign | -0.501 | Destabilizing | 0.997 | D | 0.517 | neutral | N | 0.414386068 | None | None | I |
L/W | 0.4403 | ambiguous | 0.3947 | ambiguous | -0.706 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
L/Y | 0.4173 | ambiguous | 0.4023 | ambiguous | -0.443 | Destabilizing | 0.999 | D | 0.687 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.