Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28654 | 86185;86186;86187 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
N2AB | 27013 | 81262;81263;81264 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
N2A | 26086 | 78481;78482;78483 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
N2B | 19589 | 58990;58991;58992 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
Novex-1 | 19714 | 59365;59366;59367 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
Novex-2 | 19781 | 59566;59567;59568 | chr2:178560172;178560171;178560170 | chr2:179424899;179424898;179424897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.908 | 0.42 | 0.772784792456 | gnomAD-4.0.0 | 3.18265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7169E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1077 | likely_benign | 0.083 | benign | -1.233 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.485518234 | None | None | N |
P/C | 0.6175 | likely_pathogenic | 0.5395 | ambiguous | -1.315 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/D | 0.9366 | likely_pathogenic | 0.9191 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/E | 0.7037 | likely_pathogenic | 0.6135 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/F | 0.7858 | likely_pathogenic | 0.7437 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
P/G | 0.6315 | likely_pathogenic | 0.5751 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/H | 0.5292 | ambiguous | 0.4714 | ambiguous | -0.891 | Destabilizing | 1.0 | D | 0.896 | deleterious | N | 0.51402621 | None | None | N |
P/I | 0.5907 | likely_pathogenic | 0.4947 | ambiguous | -0.799 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/K | 0.6652 | likely_pathogenic | 0.5523 | ambiguous | -0.945 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/L | 0.3203 | likely_benign | 0.2713 | benign | -0.799 | Destabilizing | 1.0 | D | 0.908 | deleterious | N | 0.520356086 | None | None | N |
P/M | 0.5526 | ambiguous | 0.4775 | ambiguous | -0.701 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/N | 0.7751 | likely_pathogenic | 0.74 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
P/Q | 0.3707 | ambiguous | 0.2953 | benign | -1.278 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/R | 0.492 | ambiguous | 0.3857 | ambiguous | -0.381 | Destabilizing | 1.0 | D | 0.918 | deleterious | N | 0.501148968 | None | None | N |
P/S | 0.2474 | likely_benign | 0.208 | benign | -1.282 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.474384206 | None | None | N |
P/T | 0.307 | likely_benign | 0.25 | benign | -1.244 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.501909436 | None | None | N |
P/V | 0.41 | ambiguous | 0.3206 | benign | -0.913 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/W | 0.9255 | likely_pathogenic | 0.9068 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
P/Y | 0.7981 | likely_pathogenic | 0.7554 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.