Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28657 | 86194;86195;86196 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
N2AB | 27016 | 81271;81272;81273 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
N2A | 26089 | 78490;78491;78492 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
N2B | 19592 | 58999;59000;59001 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
Novex-1 | 19717 | 59374;59375;59376 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
Novex-2 | 19784 | 59575;59576;59577 | chr2:178560163;178560162;178560161 | chr2:179424890;179424889;179424888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1423891310 | 0.065 | 0.892 | N | 0.553 | 0.215 | 0.369867359543 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/T | rs1423891310 | 0.065 | 0.892 | N | 0.553 | 0.215 | 0.369867359543 | gnomAD-4.0.0 | 1.0948E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43923E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.53 | ambiguous | 0.4766 | ambiguous | -0.346 | Destabilizing | 0.916 | D | 0.51 | neutral | None | None | None | None | N |
K/C | 0.7429 | likely_pathogenic | 0.6951 | pathogenic | -0.334 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.7948 | likely_pathogenic | 0.7917 | pathogenic | -0.151 | Destabilizing | 0.95 | D | 0.563 | neutral | None | None | None | None | N |
K/E | 0.3884 | ambiguous | 0.3972 | ambiguous | -0.134 | Destabilizing | 0.892 | D | 0.469 | neutral | N | 0.498796963 | None | None | N |
K/F | 0.8451 | likely_pathogenic | 0.8151 | pathogenic | -0.589 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/G | 0.6759 | likely_pathogenic | 0.6385 | pathogenic | -0.589 | Destabilizing | 0.845 | D | 0.535 | neutral | None | None | None | None | N |
K/H | 0.4173 | ambiguous | 0.3967 | ambiguous | -1.103 | Destabilizing | 0.987 | D | 0.619 | neutral | None | None | None | None | N |
K/I | 0.5005 | ambiguous | 0.4498 | ambiguous | 0.228 | Stabilizing | 0.983 | D | 0.708 | prob.delet. | N | 0.473330568 | None | None | N |
K/L | 0.5028 | ambiguous | 0.4488 | ambiguous | 0.228 | Stabilizing | 0.975 | D | 0.533 | neutral | None | None | None | None | N |
K/M | 0.3759 | ambiguous | 0.3519 | ambiguous | 0.398 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
K/N | 0.6388 | likely_pathogenic | 0.6269 | pathogenic | 0.008 | Stabilizing | 0.056 | N | 0.247 | neutral | N | 0.453731103 | None | None | N |
K/P | 0.779 | likely_pathogenic | 0.6644 | pathogenic | 0.065 | Stabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
K/Q | 0.2126 | likely_benign | 0.2079 | benign | -0.294 | Destabilizing | 0.967 | D | 0.531 | neutral | N | 0.496642092 | None | None | N |
K/R | 0.0931 | likely_benign | 0.0862 | benign | -0.221 | Destabilizing | 0.025 | N | 0.28 | neutral | N | 0.467724694 | None | None | N |
K/S | 0.61 | likely_pathogenic | 0.5758 | pathogenic | -0.589 | Destabilizing | 0.845 | D | 0.463 | neutral | None | None | None | None | N |
K/T | 0.3551 | ambiguous | 0.3227 | benign | -0.41 | Destabilizing | 0.892 | D | 0.553 | neutral | N | 0.490332195 | None | None | N |
K/V | 0.4432 | ambiguous | 0.3957 | ambiguous | 0.065 | Stabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | N |
K/W | 0.8602 | likely_pathogenic | 0.8241 | pathogenic | -0.483 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.7041 | likely_pathogenic | 0.6804 | pathogenic | -0.119 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.