Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28663 | 86212;86213;86214 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
N2AB | 27022 | 81289;81290;81291 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
N2A | 26095 | 78508;78509;78510 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
N2B | 19598 | 59017;59018;59019 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
Novex-1 | 19723 | 59392;59393;59394 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
Novex-2 | 19790 | 59593;59594;59595 | chr2:178560145;178560144;178560143 | chr2:179424872;179424871;179424870 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.698 | N | 0.579 | 0.225 | 0.497214377195 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85891E-06 | 0 | 0 |
S/T | None | None | 0.014 | N | 0.35 | 0.111 | 0.110078149338 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1118 | likely_benign | 0.0983 | benign | -0.192 | Destabilizing | 0.489 | N | 0.457 | neutral | N | 0.456603624 | None | None | N |
S/C | 0.092 | likely_benign | 0.0942 | benign | -0.733 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
S/D | 0.8453 | likely_pathogenic | 0.8328 | pathogenic | -1.757 | Destabilizing | 0.86 | D | 0.519 | neutral | None | None | None | None | N |
S/E | 0.8629 | likely_pathogenic | 0.8402 | pathogenic | -1.745 | Destabilizing | 0.86 | D | 0.527 | neutral | None | None | None | None | N |
S/F | 0.2309 | likely_benign | 0.244 | benign | -0.828 | Destabilizing | 0.915 | D | 0.617 | neutral | None | None | None | None | N |
S/G | 0.1903 | likely_benign | 0.1634 | benign | -0.355 | Destabilizing | 0.86 | D | 0.501 | neutral | None | None | None | None | N |
S/H | 0.4395 | ambiguous | 0.4674 | ambiguous | -0.949 | Destabilizing | 0.956 | D | 0.621 | neutral | None | None | None | None | N |
S/I | 0.2394 | likely_benign | 0.1994 | benign | 0.128 | Stabilizing | 0.956 | D | 0.616 | neutral | None | None | None | None | N |
S/K | 0.8923 | likely_pathogenic | 0.876 | pathogenic | -0.367 | Destabilizing | 0.86 | D | 0.525 | neutral | None | None | None | None | N |
S/L | 0.159 | likely_benign | 0.1459 | benign | 0.128 | Stabilizing | 0.698 | D | 0.579 | neutral | N | 0.474130592 | None | None | N |
S/M | 0.2705 | likely_benign | 0.2555 | benign | 0.321 | Stabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
S/N | 0.3422 | ambiguous | 0.3307 | benign | -0.77 | Destabilizing | 0.86 | D | 0.522 | neutral | None | None | None | None | N |
S/P | 0.8898 | likely_pathogenic | 0.8664 | pathogenic | 0.05 | Stabilizing | 0.97 | D | 0.613 | neutral | N | 0.493295143 | None | None | N |
S/Q | 0.7279 | likely_pathogenic | 0.7136 | pathogenic | -1.086 | Destabilizing | 0.978 | D | 0.555 | neutral | None | None | None | None | N |
S/R | 0.8158 | likely_pathogenic | 0.7985 | pathogenic | -0.189 | Destabilizing | 0.956 | D | 0.62 | neutral | None | None | None | None | N |
S/T | 0.0897 | likely_benign | 0.0813 | benign | -0.488 | Destabilizing | 0.014 | N | 0.35 | neutral | N | 0.435150916 | None | None | N |
S/V | 0.2373 | likely_benign | 0.2057 | benign | 0.05 | Stabilizing | 0.754 | D | 0.576 | neutral | None | None | None | None | N |
S/W | 0.3608 | ambiguous | 0.4253 | ambiguous | -0.988 | Destabilizing | 0.994 | D | 0.703 | prob.neutral | None | None | None | None | N |
S/Y | 0.1776 | likely_benign | 0.2102 | benign | -0.522 | Destabilizing | 0.043 | N | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.