Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28665 | 86218;86219;86220 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
N2AB | 27024 | 81295;81296;81297 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
N2A | 26097 | 78514;78515;78516 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
N2B | 19600 | 59023;59024;59025 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
Novex-1 | 19725 | 59398;59399;59400 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
Novex-2 | 19792 | 59599;59600;59601 | chr2:178560139;178560138;178560137 | chr2:179424866;179424865;179424864 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1409897523 | None | 0.977 | N | 0.543 | 0.197 | 0.311079019809 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs1409897523 | None | 0.977 | N | 0.543 | 0.197 | 0.311079019809 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.516 | ambiguous | 0.4207 | ambiguous | -0.087 | Destabilizing | 0.983 | D | 0.597 | neutral | None | None | None | None | N |
K/C | 0.7989 | likely_pathogenic | 0.7174 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
K/D | 0.7143 | likely_pathogenic | 0.6483 | pathogenic | None | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/E | 0.3088 | likely_benign | 0.2578 | benign | -0.003 | Destabilizing | 0.977 | D | 0.543 | neutral | N | 0.446501273 | None | None | N |
K/F | 0.8822 | likely_pathogenic | 0.8158 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.5959 | likely_pathogenic | 0.4861 | ambiguous | -0.29 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
K/H | 0.4291 | ambiguous | 0.3612 | ambiguous | -0.728 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.5555 | ambiguous | 0.4698 | ambiguous | 0.369 | Stabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
K/L | 0.5044 | ambiguous | 0.4314 | ambiguous | 0.369 | Stabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | N |
K/M | 0.3796 | ambiguous | 0.3089 | benign | 0.431 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.484143895 | None | None | N |
K/N | 0.5748 | likely_pathogenic | 0.4907 | ambiguous | 0.258 | Stabilizing | 0.993 | D | 0.713 | prob.delet. | N | 0.490081479 | None | None | N |
K/P | 0.6411 | likely_pathogenic | 0.5989 | pathogenic | 0.246 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/Q | 0.1921 | likely_benign | 0.1589 | benign | -0.012 | Destabilizing | 0.993 | D | 0.71 | prob.delet. | N | 0.506397726 | None | None | N |
K/R | 0.0866 | likely_benign | 0.0761 | benign | 0.015 | Stabilizing | 0.235 | N | 0.329 | neutral | N | 0.459259927 | None | None | N |
K/S | 0.5738 | likely_pathogenic | 0.4718 | ambiguous | -0.274 | Destabilizing | 0.983 | D | 0.639 | neutral | None | None | None | None | N |
K/T | 0.3331 | likely_benign | 0.2745 | benign | -0.128 | Destabilizing | 0.997 | D | 0.678 | prob.neutral | N | 0.501778553 | None | None | N |
K/V | 0.5205 | ambiguous | 0.4439 | ambiguous | 0.246 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/W | 0.8771 | likely_pathogenic | 0.811 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
K/Y | 0.7529 | likely_pathogenic | 0.6722 | pathogenic | 0.019 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.