Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28666 | 86221;86222;86223 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
N2AB | 27025 | 81298;81299;81300 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
N2A | 26098 | 78517;78518;78519 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
N2B | 19601 | 59026;59027;59028 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
Novex-1 | 19726 | 59401;59402;59403 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
Novex-2 | 19793 | 59602;59603;59604 | chr2:178560136;178560135;178560134 | chr2:179424863;179424862;179424861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1703111112 | None | 0.983 | N | 0.527 | 0.411 | 0.450248222533 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 8.99517E-07 | 0 | 0 |
T/P | rs755715518 | -0.538 | 0.983 | N | 0.526 | 0.504 | 0.44153150616 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/P | rs755715518 | -0.538 | 0.983 | N | 0.526 | 0.504 | 0.44153150616 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0952 | likely_benign | 0.0848 | benign | -0.728 | Destabilizing | 0.63 | D | 0.436 | neutral | N | 0.475606109 | None | None | N |
T/C | 0.4508 | ambiguous | 0.3923 | ambiguous | -0.307 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
T/D | 0.2471 | likely_benign | 0.2262 | benign | 0.079 | Stabilizing | 0.845 | D | 0.469 | neutral | None | None | None | None | N |
T/E | 0.2683 | likely_benign | 0.2506 | benign | 0.008 | Stabilizing | 0.916 | D | 0.463 | neutral | None | None | None | None | N |
T/F | 0.3097 | likely_benign | 0.2613 | benign | -1.338 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
T/G | 0.1924 | likely_benign | 0.1656 | benign | -0.833 | Destabilizing | 0.845 | D | 0.48 | neutral | None | None | None | None | N |
T/H | 0.2113 | likely_benign | 0.1978 | benign | -1.337 | Destabilizing | 0.997 | D | 0.632 | neutral | None | None | None | None | N |
T/I | 0.398 | ambiguous | 0.3486 | ambiguous | -0.556 | Destabilizing | 0.983 | D | 0.527 | neutral | N | 0.507788921 | None | None | N |
T/K | 0.237 | likely_benign | 0.2203 | benign | -0.259 | Destabilizing | 0.892 | D | 0.465 | neutral | N | 0.520852677 | None | None | N |
T/L | 0.1496 | likely_benign | 0.1289 | benign | -0.556 | Destabilizing | 0.916 | D | 0.465 | neutral | None | None | None | None | N |
T/M | 0.1019 | likely_benign | 0.0967 | benign | -0.036 | Destabilizing | 0.999 | D | 0.511 | neutral | None | None | None | None | N |
T/N | 0.075 | likely_benign | 0.0718 | benign | -0.032 | Destabilizing | 0.073 | N | 0.273 | neutral | None | None | None | None | N |
T/P | 0.4535 | ambiguous | 0.3801 | ambiguous | -0.589 | Destabilizing | 0.983 | D | 0.526 | neutral | N | 0.501712534 | None | None | N |
T/Q | 0.2063 | likely_benign | 0.1989 | benign | -0.382 | Destabilizing | 0.975 | D | 0.535 | neutral | None | None | None | None | N |
T/R | 0.2076 | likely_benign | 0.1936 | benign | -0.049 | Destabilizing | 0.967 | D | 0.529 | neutral | N | 0.492127281 | None | None | N |
T/S | 0.0778 | likely_benign | 0.0726 | benign | -0.302 | Destabilizing | 0.099 | N | 0.263 | neutral | N | 0.438156723 | None | None | N |
T/V | 0.2826 | likely_benign | 0.2429 | benign | -0.589 | Destabilizing | 0.916 | D | 0.475 | neutral | None | None | None | None | N |
T/W | 0.6517 | likely_pathogenic | 0.6037 | pathogenic | -1.247 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
T/Y | 0.2523 | likely_benign | 0.2185 | benign | -0.968 | Destabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.