Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28668 | 86227;86228;86229 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
N2AB | 27027 | 81304;81305;81306 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
N2A | 26100 | 78523;78524;78525 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
N2B | 19603 | 59032;59033;59034 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
Novex-1 | 19728 | 59407;59408;59409 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
Novex-2 | 19795 | 59608;59609;59610 | chr2:178560130;178560129;178560128 | chr2:179424857;179424856;179424855 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs374022393 | -2.356 | 0.988 | N | 0.813 | 0.515 | 0.855298891377 | gnomAD-2.1.1 | 3.23E-05 | None | None | None | None | N | None | 0 | 2.32099E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/K | rs374022393 | -2.356 | 0.988 | N | 0.813 | 0.515 | 0.855298891377 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/K | rs374022393 | -2.356 | 0.988 | N | 0.813 | 0.515 | 0.855298891377 | gnomAD-4.0.0 | 8.05661E-06 | None | None | None | None | N | None | 0 | 1.50045E-04 | None | 0 | 0 | None | 0 | 0 | 1.69527E-06 | 2.19635E-05 | 0 |
I/T | rs374022393 | -3.205 | 0.92 | N | 0.746 | 0.423 | None | gnomAD-2.1.1 | 4.65E-05 | None | None | None | None | N | None | 4.96155E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.85E-06 | 0 |
I/T | rs374022393 | -3.205 | 0.92 | N | 0.746 | 0.423 | None | gnomAD-3.1.2 | 1.18331E-04 | None | None | None | None | N | None | 4.34321E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs374022393 | -3.205 | 0.92 | N | 0.746 | 0.423 | None | gnomAD-4.0.0 | 3.78041E-05 | None | None | None | None | N | None | 5.47309E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44098E-05 | 1.09818E-05 | 3.20236E-05 |
I/V | rs72648225 | -1.667 | 0.021 | N | 0.213 | 0.085 | None | gnomAD-2.1.1 | 1.07365E-04 | None | None | None | None | N | None | 1.24028E-04 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 8.00897E-04 | 4.71E-05 | 0 |
I/V | rs72648225 | -1.667 | 0.021 | N | 0.213 | 0.085 | None | gnomAD-3.1.2 | 1.31482E-04 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 7.53438E-04 | 0 | 1.32283E-04 | 0 | 0 |
I/V | rs72648225 | -1.667 | 0.021 | N | 0.213 | 0.085 | None | gnomAD-4.0.0 | 6.56927E-05 | None | None | None | None | N | None | 4.00555E-05 | 0 | None | 0 | 0 | None | 5.78143E-04 | 0 | 5.34011E-05 | 2.19621E-05 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6809 | likely_pathogenic | 0.5828 | pathogenic | -2.766 | Highly Destabilizing | 0.079 | N | 0.52 | neutral | None | None | None | None | N |
I/C | 0.8461 | likely_pathogenic | 0.8221 | pathogenic | -2.67 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
I/D | 0.9947 | likely_pathogenic | 0.9923 | pathogenic | -3.138 | Highly Destabilizing | 0.997 | D | 0.822 | deleterious | None | None | None | None | N |
I/E | 0.9851 | likely_pathogenic | 0.9797 | pathogenic | -2.849 | Highly Destabilizing | 0.991 | D | 0.814 | deleterious | None | None | None | None | N |
I/F | 0.5045 | ambiguous | 0.4575 | ambiguous | -1.699 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/G | 0.9636 | likely_pathogenic | 0.9434 | pathogenic | -3.35 | Highly Destabilizing | 0.939 | D | 0.78 | deleterious | None | None | None | None | N |
I/H | 0.9713 | likely_pathogenic | 0.9629 | pathogenic | -2.884 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
I/K | 0.9631 | likely_pathogenic | 0.9538 | pathogenic | -1.994 | Destabilizing | 0.988 | D | 0.813 | deleterious | N | 0.518051908 | None | None | N |
I/L | 0.1863 | likely_benign | 0.1819 | benign | -1.03 | Destabilizing | 0.509 | D | 0.495 | neutral | N | 0.482861931 | None | None | N |
I/M | 0.1529 | likely_benign | 0.1424 | benign | -1.51 | Destabilizing | 0.988 | D | 0.66 | neutral | N | 0.515403998 | None | None | N |
I/N | 0.911 | likely_pathogenic | 0.8885 | pathogenic | -2.563 | Highly Destabilizing | 0.997 | D | 0.835 | deleterious | None | None | None | None | N |
I/P | 0.9953 | likely_pathogenic | 0.9911 | pathogenic | -1.597 | Destabilizing | 0.997 | D | 0.828 | deleterious | None | None | None | None | N |
I/Q | 0.957 | likely_pathogenic | 0.9472 | pathogenic | -2.302 | Highly Destabilizing | 0.997 | D | 0.832 | deleterious | None | None | None | None | N |
I/R | 0.9428 | likely_pathogenic | 0.927 | pathogenic | -1.948 | Destabilizing | 0.988 | D | 0.833 | deleterious | N | 0.518051908 | None | None | N |
I/S | 0.8422 | likely_pathogenic | 0.782 | pathogenic | -3.275 | Highly Destabilizing | 0.884 | D | 0.763 | deleterious | None | None | None | None | N |
I/T | 0.7818 | likely_pathogenic | 0.7077 | pathogenic | -2.818 | Highly Destabilizing | 0.92 | D | 0.746 | deleterious | N | 0.491046883 | None | None | N |
I/V | 0.0766 | likely_benign | 0.066 | benign | -1.597 | Destabilizing | 0.021 | N | 0.213 | neutral | N | 0.414698286 | None | None | N |
I/W | 0.9816 | likely_pathogenic | 0.9791 | pathogenic | -1.968 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
I/Y | 0.9137 | likely_pathogenic | 0.8968 | pathogenic | -1.782 | Destabilizing | 0.997 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.