Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28681 | 86266;86267;86268 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
N2AB | 27040 | 81343;81344;81345 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
N2A | 26113 | 78562;78563;78564 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
N2B | 19616 | 59071;59072;59073 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
Novex-1 | 19741 | 59446;59447;59448 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
Novex-2 | 19808 | 59647;59648;59649 | chr2:178560091;178560090;178560089 | chr2:179424818;179424817;179424816 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.201 | N | 0.67 | 0.253 | 0.445210270852 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 8.99462E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3187 | likely_benign | 0.3288 | benign | -0.778 | Destabilizing | 0.947 | D | 0.722 | prob.delet. | None | None | None | None | I |
A/D | 0.5248 | ambiguous | 0.552 | ambiguous | -0.863 | Destabilizing | 0.638 | D | 0.706 | prob.neutral | N | 0.487177247 | None | None | I |
A/E | 0.4499 | ambiguous | 0.4613 | ambiguous | -0.994 | Destabilizing | 0.7 | D | 0.707 | prob.neutral | None | None | None | None | I |
A/F | 0.3484 | ambiguous | 0.3341 | benign | -1.063 | Destabilizing | 0.826 | D | 0.713 | prob.delet. | None | None | None | None | I |
A/G | 0.1665 | likely_benign | 0.1633 | benign | -0.723 | Destabilizing | 0.201 | N | 0.614 | neutral | N | 0.480707061 | None | None | I |
A/H | 0.5498 | ambiguous | 0.5557 | ambiguous | -0.82 | Destabilizing | 0.947 | D | 0.714 | prob.delet. | None | None | None | None | I |
A/I | 0.3688 | ambiguous | 0.3614 | ambiguous | -0.452 | Destabilizing | 0.539 | D | 0.706 | prob.neutral | None | None | None | None | I |
A/K | 0.7369 | likely_pathogenic | 0.7439 | pathogenic | -0.968 | Destabilizing | 0.539 | D | 0.707 | prob.neutral | None | None | None | None | I |
A/L | 0.1965 | likely_benign | 0.1924 | benign | -0.452 | Destabilizing | 0.25 | N | 0.669 | neutral | None | None | None | None | I |
A/M | 0.2125 | likely_benign | 0.2131 | benign | -0.329 | Destabilizing | 0.947 | D | 0.689 | prob.neutral | None | None | None | None | I |
A/N | 0.377 | ambiguous | 0.3862 | ambiguous | -0.571 | Destabilizing | 0.539 | D | 0.709 | prob.delet. | None | None | None | None | I |
A/P | 0.9698 | likely_pathogenic | 0.9695 | pathogenic | -0.463 | Destabilizing | 0.781 | D | 0.707 | prob.neutral | N | 0.495526654 | None | None | I |
A/Q | 0.4693 | ambiguous | 0.4594 | ambiguous | -0.867 | Destabilizing | 0.7 | D | 0.694 | prob.neutral | None | None | None | None | I |
A/R | 0.6906 | likely_pathogenic | 0.6951 | pathogenic | -0.47 | Destabilizing | 0.7 | D | 0.703 | prob.neutral | None | None | None | None | I |
A/S | 0.0727 | likely_benign | 0.0716 | benign | -0.804 | Destabilizing | 0.007 | N | 0.435 | neutral | N | 0.39745932 | None | None | I |
A/T | 0.1093 | likely_benign | 0.1073 | benign | -0.857 | Destabilizing | 0.002 | N | 0.517 | neutral | N | 0.493353858 | None | None | I |
A/V | 0.1884 | likely_benign | 0.1778 | benign | -0.463 | Destabilizing | 0.201 | N | 0.67 | neutral | N | 0.518326873 | None | None | I |
A/W | 0.8319 | likely_pathogenic | 0.8286 | pathogenic | -1.24 | Destabilizing | 0.982 | D | 0.743 | deleterious | None | None | None | None | I |
A/Y | 0.5041 | ambiguous | 0.4919 | ambiguous | -0.895 | Destabilizing | 0.826 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.