Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28683 | 86272;86273;86274 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
N2AB | 27042 | 81349;81350;81351 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
N2A | 26115 | 78568;78569;78570 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
N2B | 19618 | 59077;59078;59079 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
Novex-1 | 19743 | 59452;59453;59454 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
Novex-2 | 19810 | 59653;59654;59655 | chr2:178560085;178560084;178560083 | chr2:179424812;179424811;179424810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1482174421 | None | 0.062 | N | 0.655 | 0.384 | 0.676853945565 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1482174421 | None | 0.062 | N | 0.655 | 0.384 | 0.676853945565 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | I | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1179601203 | -1.599 | None | N | 0.136 | 0.195 | 0.185906805712 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8767 | likely_pathogenic | 0.8646 | pathogenic | -2.096 | Highly Destabilizing | 0.035 | N | 0.491 | neutral | None | None | None | None | I |
I/C | 0.9379 | likely_pathogenic | 0.928 | pathogenic | -1.225 | Destabilizing | 0.824 | D | 0.686 | prob.neutral | None | None | None | None | I |
I/D | 0.9938 | likely_pathogenic | 0.993 | pathogenic | -1.803 | Destabilizing | 0.555 | D | 0.789 | deleterious | None | None | None | None | I |
I/E | 0.9814 | likely_pathogenic | 0.9798 | pathogenic | -1.749 | Destabilizing | 0.555 | D | 0.796 | deleterious | None | None | None | None | I |
I/F | 0.8704 | likely_pathogenic | 0.8315 | pathogenic | -1.436 | Destabilizing | 0.38 | N | 0.684 | prob.neutral | None | None | None | None | I |
I/G | 0.9813 | likely_pathogenic | 0.9774 | pathogenic | -2.485 | Highly Destabilizing | 0.262 | N | 0.797 | deleterious | None | None | None | None | I |
I/H | 0.9889 | likely_pathogenic | 0.9866 | pathogenic | -1.714 | Destabilizing | 0.935 | D | 0.757 | deleterious | None | None | None | None | I |
I/K | 0.9785 | likely_pathogenic | 0.9755 | pathogenic | -1.454 | Destabilizing | 0.484 | N | 0.799 | deleterious | N | 0.518539796 | None | None | I |
I/L | 0.2926 | likely_benign | 0.3081 | benign | -1.06 | Destabilizing | 0.005 | N | 0.345 | neutral | N | 0.508576813 | None | None | I |
I/M | 0.4423 | ambiguous | 0.4327 | ambiguous | -0.757 | Destabilizing | 0.317 | N | 0.675 | prob.neutral | N | 0.517525838 | None | None | I |
I/N | 0.9172 | likely_pathogenic | 0.9111 | pathogenic | -1.35 | Destabilizing | 0.791 | D | 0.791 | deleterious | None | None | None | None | I |
I/P | 0.9184 | likely_pathogenic | 0.912 | pathogenic | -1.378 | Destabilizing | 0.555 | D | 0.783 | deleterious | None | None | None | None | I |
I/Q | 0.977 | likely_pathogenic | 0.9738 | pathogenic | -1.493 | Destabilizing | 0.791 | D | 0.793 | deleterious | None | None | None | None | I |
I/R | 0.9734 | likely_pathogenic | 0.9684 | pathogenic | -0.856 | Destabilizing | 0.484 | N | 0.791 | deleterious | D | 0.529896102 | None | None | I |
I/S | 0.9185 | likely_pathogenic | 0.9093 | pathogenic | -2.004 | Highly Destabilizing | 0.149 | N | 0.765 | deleterious | None | None | None | None | I |
I/T | 0.8356 | likely_pathogenic | 0.8234 | pathogenic | -1.831 | Destabilizing | 0.062 | N | 0.655 | neutral | N | 0.494902133 | None | None | I |
I/V | 0.0566 | likely_benign | 0.0535 | benign | -1.378 | Destabilizing | None | N | 0.136 | neutral | N | 0.432828261 | None | None | I |
I/W | 0.9973 | likely_pathogenic | 0.9964 | pathogenic | -1.592 | Destabilizing | 0.935 | D | 0.764 | deleterious | None | None | None | None | I |
I/Y | 0.981 | likely_pathogenic | 0.9745 | pathogenic | -1.369 | Destabilizing | 0.555 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.