Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28692 | 86299;86300;86301 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
N2AB | 27051 | 81376;81377;81378 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
N2A | 26124 | 78595;78596;78597 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
N2B | 19627 | 59104;59105;59106 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
Novex-1 | 19752 | 59479;59480;59481 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
Novex-2 | 19819 | 59680;59681;59682 | chr2:178560058;178560057;178560056 | chr2:179424785;179424784;179424783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | None | N | 0.08 | 0.111 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | None | None | None | N | 0.105 | 0.116 | 0.0611884634855 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2478 | likely_benign | 0.1995 | benign | -0.811 | Destabilizing | None | N | 0.138 | neutral | None | None | None | None | N |
K/C | 0.5185 | ambiguous | 0.4448 | ambiguous | -0.77 | Destabilizing | 0.676 | D | 0.298 | neutral | None | None | None | None | N |
K/D | 0.5346 | ambiguous | 0.4588 | ambiguous | -0.351 | Destabilizing | 0.038 | N | 0.271 | neutral | None | None | None | None | N |
K/E | 0.1629 | likely_benign | 0.1427 | benign | -0.219 | Destabilizing | 0.012 | N | 0.191 | neutral | N | 0.460123932 | None | None | N |
K/F | 0.6594 | likely_pathogenic | 0.5878 | pathogenic | -0.431 | Destabilizing | 0.214 | N | 0.346 | neutral | None | None | None | None | N |
K/G | 0.3594 | ambiguous | 0.3044 | benign | -1.2 | Destabilizing | 0.016 | N | 0.27 | neutral | None | None | None | None | N |
K/H | 0.3029 | likely_benign | 0.2645 | benign | -1.495 | Destabilizing | 0.356 | N | 0.323 | neutral | None | None | None | None | N |
K/I | 0.2436 | likely_benign | 0.1948 | benign | 0.211 | Stabilizing | None | N | 0.241 | neutral | N | 0.516212075 | None | None | N |
K/L | 0.1825 | likely_benign | 0.1498 | benign | 0.211 | Stabilizing | 0.006 | N | 0.277 | neutral | None | None | None | None | N |
K/M | 0.138 | likely_benign | 0.113 | benign | 0.123 | Stabilizing | 0.002 | N | 0.226 | neutral | None | None | None | None | N |
K/N | 0.3039 | likely_benign | 0.2483 | benign | -0.717 | Destabilizing | None | N | 0.08 | neutral | N | 0.494796652 | None | None | N |
K/P | 0.4059 | ambiguous | 0.3558 | ambiguous | -0.1 | Destabilizing | 0.136 | N | 0.359 | neutral | None | None | None | None | N |
K/Q | 0.1092 | likely_benign | 0.0975 | benign | -0.761 | Destabilizing | 0.001 | N | 0.086 | neutral | N | 0.503818781 | None | None | N |
K/R | 0.0819 | likely_benign | 0.0789 | benign | -0.725 | Destabilizing | None | N | 0.105 | neutral | N | 0.486697244 | None | None | N |
K/S | 0.3368 | likely_benign | 0.2625 | benign | -1.396 | Destabilizing | 0.016 | N | 0.171 | neutral | None | None | None | None | N |
K/T | 0.1688 | likely_benign | 0.1161 | benign | -1.046 | Destabilizing | None | N | 0.19 | neutral | N | 0.475864175 | None | None | N |
K/V | 0.2176 | likely_benign | 0.1712 | benign | -0.1 | Destabilizing | 0.006 | N | 0.274 | neutral | None | None | None | None | N |
K/W | 0.7196 | likely_pathogenic | 0.6666 | pathogenic | -0.287 | Destabilizing | 0.864 | D | 0.319 | neutral | None | None | None | None | N |
K/Y | 0.5471 | ambiguous | 0.4782 | ambiguous | -0.009 | Destabilizing | 0.356 | N | 0.33 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.