Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28694 | 86305;86306;86307 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
N2AB | 27053 | 81382;81383;81384 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
N2A | 26126 | 78601;78602;78603 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
N2B | 19629 | 59110;59111;59112 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
Novex-1 | 19754 | 59485;59486;59487 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
Novex-2 | 19821 | 59686;59687;59688 | chr2:178560052;178560051;178560050 | chr2:179424779;179424778;179424777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.295 | N | 0.196 | 0.157 | 0.289098819767 | gnomAD-4.0.0 | 6.84256E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
D/N | rs796298969 | None | 0.001 | N | 0.225 | 0.119 | 0.231873229951 | gnomAD-4.0.0 | 4.78979E-06 | None | None | None | None | N | None | 8.96164E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59781E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0969 | likely_benign | 0.0964 | benign | -0.11 | Destabilizing | 0.012 | N | 0.278 | neutral | N | 0.458107921 | None | None | N |
D/C | 0.3841 | ambiguous | 0.3506 | ambiguous | 0.034 | Stabilizing | 0.864 | D | 0.185 | neutral | None | None | None | None | N |
D/E | 0.0963 | likely_benign | 0.093 | benign | -0.284 | Destabilizing | None | N | 0.179 | neutral | N | 0.47396002 | None | None | N |
D/F | 0.4391 | ambiguous | 0.4183 | ambiguous | -0.215 | Destabilizing | 0.214 | N | 0.222 | neutral | None | None | None | None | N |
D/G | 0.082 | likely_benign | 0.0827 | benign | -0.233 | Destabilizing | 0.012 | N | 0.249 | neutral | N | 0.415853079 | None | None | N |
D/H | 0.1762 | likely_benign | 0.1787 | benign | 0.222 | Stabilizing | 0.295 | N | 0.196 | neutral | N | 0.503437565 | None | None | N |
D/I | 0.2126 | likely_benign | 0.2027 | benign | 0.15 | Stabilizing | 0.038 | N | 0.242 | neutral | None | None | None | None | N |
D/K | 0.1844 | likely_benign | 0.1818 | benign | 0.472 | Stabilizing | 0.038 | N | 0.239 | neutral | None | None | None | None | N |
D/L | 0.2312 | likely_benign | 0.2184 | benign | 0.15 | Stabilizing | None | N | 0.282 | neutral | None | None | None | None | N |
D/M | 0.3546 | ambiguous | 0.3398 | benign | 0.14 | Stabilizing | 0.214 | N | 0.189 | neutral | None | None | None | None | N |
D/N | 0.0724 | likely_benign | 0.0731 | benign | 0.254 | Stabilizing | 0.001 | N | 0.225 | neutral | N | 0.45077373 | None | None | N |
D/P | 0.46 | ambiguous | 0.4586 | ambiguous | 0.083 | Stabilizing | 0.356 | N | 0.242 | neutral | None | None | None | None | N |
D/Q | 0.1788 | likely_benign | 0.173 | benign | 0.246 | Stabilizing | 0.038 | N | 0.191 | neutral | None | None | None | None | N |
D/R | 0.2287 | likely_benign | 0.2219 | benign | 0.63 | Stabilizing | 0.12 | N | 0.26 | neutral | None | None | None | None | N |
D/S | 0.072 | likely_benign | 0.0732 | benign | 0.159 | Stabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
D/T | 0.1103 | likely_benign | 0.107 | benign | 0.256 | Stabilizing | 0.016 | N | 0.235 | neutral | None | None | None | None | N |
D/V | 0.1381 | likely_benign | 0.134 | benign | 0.083 | Stabilizing | 0.001 | N | 0.277 | neutral | N | 0.488545471 | None | None | N |
D/W | 0.7541 | likely_pathogenic | 0.743 | pathogenic | -0.154 | Destabilizing | 0.864 | D | 0.263 | neutral | None | None | None | None | N |
D/Y | 0.1953 | likely_benign | 0.1975 | benign | 0.012 | Stabilizing | 0.56 | D | 0.215 | neutral | N | 0.47541139 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.