Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28704 | 86335;86336;86337 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
N2AB | 27063 | 81412;81413;81414 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
N2A | 26136 | 78631;78632;78633 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
N2B | 19639 | 59140;59141;59142 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
Novex-1 | 19764 | 59515;59516;59517 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
Novex-2 | 19831 | 59716;59717;59718 | chr2:178560022;178560021;178560020 | chr2:179424749;179424748;179424747 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | None | N | 0.103 | 0.067 | 0.158396225186 | gnomAD-4.0.0 | 4.80131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25003E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.079 | likely_benign | 0.0879 | benign | -0.311 | Destabilizing | 0.007 | N | 0.155 | neutral | None | None | None | None | N |
S/C | 0.0709 | likely_benign | 0.073 | benign | -0.298 | Destabilizing | None | N | 0.223 | neutral | N | 0.519849813 | None | None | N |
S/D | 0.2125 | likely_benign | 0.2035 | benign | 0.46 | Stabilizing | 0.016 | N | 0.184 | neutral | None | None | None | None | N |
S/E | 0.3341 | likely_benign | 0.3309 | benign | 0.395 | Stabilizing | 0.016 | N | 0.174 | neutral | None | None | None | None | N |
S/F | 0.1452 | likely_benign | 0.1658 | benign | -0.766 | Destabilizing | 0.356 | N | 0.43 | neutral | None | None | None | None | N |
S/G | 0.0686 | likely_benign | 0.0696 | benign | -0.465 | Destabilizing | None | N | 0.103 | neutral | N | 0.443215826 | None | None | N |
S/H | 0.1653 | likely_benign | 0.1579 | benign | -0.9 | Destabilizing | 0.214 | N | 0.379 | neutral | None | None | None | None | N |
S/I | 0.1208 | likely_benign | 0.1198 | benign | -0.035 | Destabilizing | 0.055 | N | 0.487 | neutral | N | 0.495068798 | None | None | N |
S/K | 0.3778 | ambiguous | 0.3731 | ambiguous | -0.376 | Destabilizing | 0.016 | N | 0.195 | neutral | None | None | None | None | N |
S/L | 0.0917 | likely_benign | 0.0987 | benign | -0.035 | Destabilizing | 0.016 | N | 0.343 | neutral | None | None | None | None | N |
S/M | 0.1368 | likely_benign | 0.1387 | benign | 0.033 | Stabilizing | 0.628 | D | 0.375 | neutral | None | None | None | None | N |
S/N | 0.0587 | likely_benign | 0.0543 | benign | -0.15 | Destabilizing | None | N | 0.107 | neutral | N | 0.416261298 | None | None | N |
S/P | 0.2113 | likely_benign | 0.2345 | benign | -0.095 | Destabilizing | 0.136 | N | 0.418 | neutral | None | None | None | None | N |
S/Q | 0.2726 | likely_benign | 0.2712 | benign | -0.323 | Destabilizing | 0.072 | N | 0.306 | neutral | None | None | None | None | N |
S/R | 0.3437 | ambiguous | 0.3631 | ambiguous | -0.241 | Destabilizing | None | N | 0.269 | neutral | N | 0.466727404 | None | None | N |
S/T | 0.0712 | likely_benign | 0.0722 | benign | -0.259 | Destabilizing | 0.012 | N | 0.206 | neutral | N | 0.447005493 | None | None | N |
S/V | 0.1269 | likely_benign | 0.1305 | benign | -0.095 | Destabilizing | 0.038 | N | 0.389 | neutral | None | None | None | None | N |
S/W | 0.2446 | likely_benign | 0.2725 | benign | -0.781 | Destabilizing | 0.864 | D | 0.398 | neutral | None | None | None | None | N |
S/Y | 0.1056 | likely_benign | 0.107 | benign | -0.487 | Destabilizing | 0.628 | D | 0.429 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.