Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28715 | 86368;86369;86370 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
N2AB | 27074 | 81445;81446;81447 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
N2A | 26147 | 78664;78665;78666 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
N2B | 19650 | 59173;59174;59175 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
Novex-1 | 19775 | 59548;59549;59550 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
Novex-2 | 19842 | 59749;59750;59751 | chr2:178559989;178559988;178559987 | chr2:179424716;179424715;179424714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1423594263 | -1.83 | 0.998 | D | 0.887 | 0.893 | 0.921956819008 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/P | rs1423594263 | -1.83 | 0.998 | D | 0.887 | 0.893 | 0.921956819008 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
L/R | None | None | 0.142 | D | 0.754 | 0.888 | 0.900562439436 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9357 | likely_pathogenic | 0.9359 | pathogenic | -2.496 | Highly Destabilizing | 0.968 | D | 0.805 | deleterious | None | None | None | None | N |
L/C | 0.8946 | likely_pathogenic | 0.905 | pathogenic | -2.363 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/D | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -1.689 | Destabilizing | 0.995 | D | 0.881 | deleterious | None | None | None | None | N |
L/E | 0.9923 | likely_pathogenic | 0.9901 | pathogenic | -1.536 | Destabilizing | 0.991 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.639 | likely_pathogenic | 0.7152 | pathogenic | -1.773 | Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
L/G | 0.986 | likely_pathogenic | 0.9853 | pathogenic | -2.97 | Highly Destabilizing | 0.991 | D | 0.874 | deleterious | None | None | None | None | N |
L/H | 0.9806 | likely_pathogenic | 0.9794 | pathogenic | -2.127 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
L/I | 0.2674 | likely_benign | 0.2608 | benign | -1.167 | Destabilizing | 0.979 | D | 0.821 | deleterious | D | 0.608015539 | None | None | N |
L/K | 0.9815 | likely_pathogenic | 0.9777 | pathogenic | -1.728 | Destabilizing | 0.982 | D | 0.846 | deleterious | None | None | None | None | N |
L/M | 0.3473 | ambiguous | 0.3829 | ambiguous | -1.285 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
L/N | 0.9881 | likely_pathogenic | 0.9853 | pathogenic | -1.861 | Destabilizing | 0.991 | D | 0.878 | deleterious | None | None | None | None | N |
L/P | 0.9867 | likely_pathogenic | 0.9845 | pathogenic | -1.587 | Destabilizing | 0.998 | D | 0.887 | deleterious | D | 0.660908001 | None | None | N |
L/Q | 0.966 | likely_pathogenic | 0.9591 | pathogenic | -1.837 | Destabilizing | 0.988 | D | 0.869 | deleterious | D | 0.623529492 | None | None | N |
L/R | 0.9698 | likely_pathogenic | 0.9629 | pathogenic | -1.327 | Destabilizing | 0.142 | N | 0.754 | deleterious | D | 0.660908001 | None | None | N |
L/S | 0.9898 | likely_pathogenic | 0.9882 | pathogenic | -2.771 | Highly Destabilizing | 0.991 | D | 0.861 | deleterious | None | None | None | None | N |
L/T | 0.957 | likely_pathogenic | 0.9521 | pathogenic | -2.458 | Highly Destabilizing | 0.991 | D | 0.834 | deleterious | None | None | None | None | N |
L/V | 0.3428 | ambiguous | 0.3348 | benign | -1.587 | Destabilizing | 0.979 | D | 0.832 | deleterious | D | 0.580962998 | None | None | N |
L/W | 0.9564 | likely_pathogenic | 0.9683 | pathogenic | -1.827 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/Y | 0.966 | likely_pathogenic | 0.9713 | pathogenic | -1.617 | Destabilizing | 0.998 | D | 0.838 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.