Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28725 | 86398;86399;86400 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
N2AB | 27084 | 81475;81476;81477 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
N2A | 26157 | 78694;78695;78696 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
N2B | 19660 | 59203;59204;59205 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
Novex-1 | 19785 | 59578;59579;59580 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
Novex-2 | 19852 | 59779;59780;59781 | chr2:178559959;178559958;178559957 | chr2:179424686;179424685;179424684 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.014 | N | 0.237 | 0.172 | 0.581056753333 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 5.65355E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1216305497 | -0.629 | 0.247 | N | 0.527 | 0.524 | 0.565281569661 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/L | rs1216305497 | -0.629 | 0.247 | N | 0.527 | 0.524 | 0.565281569661 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9184 | likely_pathogenic | 0.8918 | pathogenic | -2.597 | Highly Destabilizing | 0.822 | D | 0.619 | neutral | D | 0.531906424 | None | None | N |
V/C | 0.967 | likely_pathogenic | 0.9543 | pathogenic | -2.245 | Highly Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/D | 0.9988 | likely_pathogenic | 0.9977 | pathogenic | -3.467 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
V/E | 0.9951 | likely_pathogenic | 0.9914 | pathogenic | -3.173 | Highly Destabilizing | 0.99 | D | 0.817 | deleterious | D | 0.632501806 | None | None | N |
V/F | 0.8981 | likely_pathogenic | 0.8668 | pathogenic | -1.294 | Destabilizing | 0.956 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/G | 0.9498 | likely_pathogenic | 0.9342 | pathogenic | -3.164 | Highly Destabilizing | 0.971 | D | 0.847 | deleterious | D | 0.632501806 | None | None | N |
V/H | 0.9985 | likely_pathogenic | 0.9974 | pathogenic | -2.874 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.0913 | likely_benign | 0.0866 | benign | -0.942 | Destabilizing | 0.014 | N | 0.237 | neutral | N | 0.519383745 | None | None | N |
V/K | 0.9961 | likely_pathogenic | 0.9934 | pathogenic | -2.019 | Highly Destabilizing | 0.978 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.7306 | likely_pathogenic | 0.5697 | pathogenic | -0.942 | Destabilizing | 0.247 | N | 0.527 | neutral | N | 0.512708851 | None | None | N |
V/M | 0.7827 | likely_pathogenic | 0.6911 | pathogenic | -1.372 | Destabilizing | 0.956 | D | 0.671 | neutral | None | None | None | None | N |
V/N | 0.9938 | likely_pathogenic | 0.9896 | pathogenic | -2.633 | Highly Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9963 | likely_pathogenic | 0.9952 | pathogenic | -1.477 | Destabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | N |
V/Q | 0.9933 | likely_pathogenic | 0.9893 | pathogenic | -2.309 | Highly Destabilizing | 0.993 | D | 0.84 | deleterious | None | None | None | None | N |
V/R | 0.9918 | likely_pathogenic | 0.9878 | pathogenic | -2.017 | Highly Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.9775 | likely_pathogenic | 0.9689 | pathogenic | -3.151 | Highly Destabilizing | 0.978 | D | 0.82 | deleterious | None | None | None | None | N |
V/T | 0.9399 | likely_pathogenic | 0.9181 | pathogenic | -2.713 | Highly Destabilizing | 0.86 | D | 0.671 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.997 | pathogenic | -1.831 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
V/Y | 0.9923 | likely_pathogenic | 0.9871 | pathogenic | -1.619 | Destabilizing | 0.978 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.