Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28727 | 86404;86405;86406 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
N2AB | 27086 | 81481;81482;81483 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
N2A | 26159 | 78700;78701;78702 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
N2B | 19662 | 59209;59210;59211 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
Novex-1 | 19787 | 59584;59585;59586 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
Novex-2 | 19854 | 59785;59786;59787 | chr2:178559953;178559952;178559951 | chr2:179424680;179424679;179424678 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs768069914 | -1.971 | 0.97 | N | 0.851 | 0.468 | 0.641611064703 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
S/F | rs768069914 | -1.971 | 0.97 | N | 0.851 | 0.468 | 0.641611064703 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0651 | likely_benign | 0.0661 | benign | -2.073 | Highly Destabilizing | 0.014 | N | 0.331 | neutral | N | 0.330008806 | None | None | N |
S/C | 0.185 | likely_benign | 0.1535 | benign | -1.798 | Destabilizing | 0.032 | N | 0.605 | neutral | N | 0.488078537 | None | None | N |
S/D | 0.9934 | likely_pathogenic | 0.9921 | pathogenic | -2.647 | Highly Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/E | 0.9955 | likely_pathogenic | 0.9948 | pathogenic | -2.437 | Highly Destabilizing | 0.86 | D | 0.7 | prob.neutral | None | None | None | None | N |
S/F | 0.9791 | likely_pathogenic | 0.9742 | pathogenic | -1.633 | Destabilizing | 0.97 | D | 0.851 | deleterious | N | 0.491204105 | None | None | N |
S/G | 0.2227 | likely_benign | 0.2236 | benign | -2.349 | Highly Destabilizing | 0.754 | D | 0.615 | neutral | None | None | None | None | N |
S/H | 0.9912 | likely_pathogenic | 0.9893 | pathogenic | -2.056 | Highly Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | N |
S/I | 0.8801 | likely_pathogenic | 0.8424 | pathogenic | -1.349 | Destabilizing | 0.956 | D | 0.843 | deleterious | None | None | None | None | N |
S/K | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.197 | Destabilizing | 0.86 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/L | 0.7134 | likely_pathogenic | 0.6677 | pathogenic | -1.349 | Destabilizing | 0.754 | D | 0.827 | deleterious | None | None | None | None | N |
S/M | 0.858 | likely_pathogenic | 0.8404 | pathogenic | -1.606 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
S/N | 0.9188 | likely_pathogenic | 0.9108 | pathogenic | -1.818 | Destabilizing | 0.978 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/P | 0.9208 | likely_pathogenic | 0.9512 | pathogenic | -1.57 | Destabilizing | 0.97 | D | 0.81 | deleterious | N | 0.467819931 | None | None | N |
S/Q | 0.9923 | likely_pathogenic | 0.9917 | pathogenic | -1.59 | Destabilizing | 0.978 | D | 0.698 | prob.neutral | None | None | None | None | N |
S/R | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -1.281 | Destabilizing | 0.978 | D | 0.807 | deleterious | None | None | None | None | N |
S/T | 0.3553 | ambiguous | 0.3298 | benign | -1.567 | Destabilizing | 0.822 | D | 0.626 | neutral | N | 0.463438612 | None | None | N |
S/V | 0.7308 | likely_pathogenic | 0.6847 | pathogenic | -1.57 | Destabilizing | 0.754 | D | 0.84 | deleterious | None | None | None | None | N |
S/W | 0.9909 | likely_pathogenic | 0.9899 | pathogenic | -1.821 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
S/Y | 0.974 | likely_pathogenic | 0.9637 | pathogenic | -1.558 | Destabilizing | 0.99 | D | 0.862 | deleterious | N | 0.491204105 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.