Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28728 | 86407;86408;86409 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
N2AB | 27087 | 81484;81485;81486 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
N2A | 26160 | 78703;78704;78705 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
N2B | 19663 | 59212;59213;59214 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
Novex-1 | 19788 | 59587;59588;59589 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
Novex-2 | 19855 | 59788;59789;59790 | chr2:178559950;178559949;178559948 | chr2:179424677;179424676;179424675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs759990422 | -0.689 | None | N | 0.18 | 0.142 | 0.139678290688 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/L | rs759990422 | -0.689 | None | N | 0.18 | 0.142 | 0.139678290688 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs759990422 | -0.689 | None | N | 0.18 | 0.142 | 0.139678290688 | gnomAD-4.0.0 | 2.47875E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39037E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.174 | likely_benign | 0.208 | benign | -1.324 | Destabilizing | 0.024 | N | 0.392 | neutral | N | 0.514177421 | None | None | I |
V/C | 0.4855 | ambiguous | 0.5513 | ambiguous | -1.589 | Destabilizing | 0.864 | D | 0.54 | neutral | None | None | None | None | I |
V/D | 0.4426 | ambiguous | 0.474 | ambiguous | -1.288 | Destabilizing | 0.171 | N | 0.641 | neutral | N | 0.484230617 | None | None | I |
V/E | 0.2795 | likely_benign | 0.2976 | benign | -1.262 | Destabilizing | 0.038 | N | 0.576 | neutral | None | None | None | None | I |
V/F | 0.1086 | likely_benign | 0.1277 | benign | -1.173 | Destabilizing | 0.093 | N | 0.603 | neutral | N | 0.513350702 | None | None | I |
V/G | 0.2668 | likely_benign | 0.3177 | benign | -1.605 | Destabilizing | 0.055 | N | 0.633 | neutral | N | 0.483977128 | None | None | I |
V/H | 0.4032 | ambiguous | 0.4724 | ambiguous | -1.076 | Destabilizing | 0.676 | D | 0.62 | neutral | None | None | None | None | I |
V/I | 0.0557 | likely_benign | 0.0594 | benign | -0.642 | Destabilizing | None | N | 0.148 | neutral | N | 0.427366513 | None | None | I |
V/K | 0.2915 | likely_benign | 0.3335 | benign | -0.867 | Destabilizing | 0.038 | N | 0.578 | neutral | None | None | None | None | I |
V/L | 0.0976 | likely_benign | 0.1146 | benign | -0.642 | Destabilizing | None | N | 0.18 | neutral | N | 0.508750172 | None | None | I |
V/M | 0.0801 | likely_benign | 0.0904 | benign | -0.88 | Destabilizing | 0.12 | N | 0.563 | neutral | None | None | None | None | I |
V/N | 0.2309 | likely_benign | 0.2695 | benign | -0.836 | Destabilizing | 0.214 | N | 0.633 | neutral | None | None | None | None | I |
V/P | 0.9272 | likely_pathogenic | 0.9424 | pathogenic | -0.839 | Destabilizing | 0.356 | N | 0.6 | neutral | None | None | None | None | I |
V/Q | 0.2408 | likely_benign | 0.2815 | benign | -1.024 | Destabilizing | 0.002 | N | 0.396 | neutral | None | None | None | None | I |
V/R | 0.2514 | likely_benign | 0.2858 | benign | -0.524 | Destabilizing | 0.12 | N | 0.644 | neutral | None | None | None | None | I |
V/S | 0.1867 | likely_benign | 0.2219 | benign | -1.439 | Destabilizing | 0.072 | N | 0.571 | neutral | None | None | None | None | I |
V/T | 0.1372 | likely_benign | 0.1638 | benign | -1.301 | Destabilizing | 0.072 | N | 0.515 | neutral | None | None | None | None | I |
V/W | 0.5982 | likely_pathogenic | 0.6715 | pathogenic | -1.279 | Destabilizing | 0.864 | D | 0.65 | neutral | None | None | None | None | I |
V/Y | 0.373 | ambiguous | 0.4038 | ambiguous | -0.923 | Destabilizing | 0.356 | N | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.