Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2872886407;86408;86409 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
N2AB2708781484;81485;81486 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
N2A2616078703;78704;78705 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
N2B1966359212;59213;59214 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
Novex-11978859587;59588;59589 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
Novex-21985559788;59789;59790 chr2:178559950;178559949;178559948chr2:179424677;179424676;179424675
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTC
  • RefSeq wild type template codon: CAG
  • Domain: Fn3-97
  • Domain position: 78
  • Structural Position: 111
  • Q(SASA): 0.1908
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/L rs759990422 -0.689 None N 0.18 0.142 0.139678290688 gnomAD-2.1.1 8.05E-06 None None None None I None 0 0 None 0 0 None 0 None 0 1.78E-05 0
V/L rs759990422 -0.689 None N 0.18 0.142 0.139678290688 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
V/L rs759990422 -0.689 None N 0.18 0.142 0.139678290688 gnomAD-4.0.0 2.47875E-06 None None None None I None 0 0 None 0 0 None 0 0 3.39037E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.174 likely_benign 0.208 benign -1.324 Destabilizing 0.024 N 0.392 neutral N 0.514177421 None None I
V/C 0.4855 ambiguous 0.5513 ambiguous -1.589 Destabilizing 0.864 D 0.54 neutral None None None None I
V/D 0.4426 ambiguous 0.474 ambiguous -1.288 Destabilizing 0.171 N 0.641 neutral N 0.484230617 None None I
V/E 0.2795 likely_benign 0.2976 benign -1.262 Destabilizing 0.038 N 0.576 neutral None None None None I
V/F 0.1086 likely_benign 0.1277 benign -1.173 Destabilizing 0.093 N 0.603 neutral N 0.513350702 None None I
V/G 0.2668 likely_benign 0.3177 benign -1.605 Destabilizing 0.055 N 0.633 neutral N 0.483977128 None None I
V/H 0.4032 ambiguous 0.4724 ambiguous -1.076 Destabilizing 0.676 D 0.62 neutral None None None None I
V/I 0.0557 likely_benign 0.0594 benign -0.642 Destabilizing None N 0.148 neutral N 0.427366513 None None I
V/K 0.2915 likely_benign 0.3335 benign -0.867 Destabilizing 0.038 N 0.578 neutral None None None None I
V/L 0.0976 likely_benign 0.1146 benign -0.642 Destabilizing None N 0.18 neutral N 0.508750172 None None I
V/M 0.0801 likely_benign 0.0904 benign -0.88 Destabilizing 0.12 N 0.563 neutral None None None None I
V/N 0.2309 likely_benign 0.2695 benign -0.836 Destabilizing 0.214 N 0.633 neutral None None None None I
V/P 0.9272 likely_pathogenic 0.9424 pathogenic -0.839 Destabilizing 0.356 N 0.6 neutral None None None None I
V/Q 0.2408 likely_benign 0.2815 benign -1.024 Destabilizing 0.002 N 0.396 neutral None None None None I
V/R 0.2514 likely_benign 0.2858 benign -0.524 Destabilizing 0.12 N 0.644 neutral None None None None I
V/S 0.1867 likely_benign 0.2219 benign -1.439 Destabilizing 0.072 N 0.571 neutral None None None None I
V/T 0.1372 likely_benign 0.1638 benign -1.301 Destabilizing 0.072 N 0.515 neutral None None None None I
V/W 0.5982 likely_pathogenic 0.6715 pathogenic -1.279 Destabilizing 0.864 D 0.65 neutral None None None None I
V/Y 0.373 ambiguous 0.4038 ambiguous -0.923 Destabilizing 0.356 N 0.593 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.