Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28729 | 86410;86411;86412 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
N2AB | 27088 | 81487;81488;81489 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
N2A | 26161 | 78706;78707;78708 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
N2B | 19664 | 59215;59216;59217 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
Novex-1 | 19789 | 59590;59591;59592 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
Novex-2 | 19856 | 59791;59792;59793 | chr2:178559947;178559946;178559945 | chr2:179424674;179424673;179424672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1703025837 | None | 0.999 | N | 0.593 | 0.514 | 0.283371740733 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1703025837 | None | 0.999 | N | 0.593 | 0.514 | 0.283371740733 | gnomAD-4.0.0 | 8.05601E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.45284E-04 | None | 0 | 0 | 8.4759E-07 | 0 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9729 | likely_pathogenic | 0.9882 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
N/C | 0.7952 | likely_pathogenic | 0.8725 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
N/D | 0.977 | likely_pathogenic | 0.985 | pathogenic | -1.978 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.520738161 | None | None | N |
N/E | 0.9966 | likely_pathogenic | 0.9976 | pathogenic | -1.805 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/F | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
N/G | 0.9333 | likely_pathogenic | 0.9645 | pathogenic | -1.226 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
N/H | 0.9381 | likely_pathogenic | 0.9602 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.551212679 | None | None | N |
N/I | 0.9787 | likely_pathogenic | 0.9858 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.769 | deleterious | D | 0.551719659 | None | None | N |
N/K | 0.9954 | likely_pathogenic | 0.9969 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.532347956 | None | None | N |
N/L | 0.9323 | likely_pathogenic | 0.9487 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
N/M | 0.9779 | likely_pathogenic | 0.9861 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
N/P | 0.9927 | likely_pathogenic | 0.9954 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
N/Q | 0.9924 | likely_pathogenic | 0.9953 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
N/R | 0.9906 | likely_pathogenic | 0.9927 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
N/S | 0.4461 | ambiguous | 0.6126 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.501086516 | None | None | N |
N/T | 0.8198 | likely_pathogenic | 0.8998 | pathogenic | -0.861 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.507399484 | None | None | N |
N/V | 0.9639 | likely_pathogenic | 0.9779 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
N/W | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -0.499 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
N/Y | 0.982 | likely_pathogenic | 0.9858 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.533361914 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.