Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2873 | 8842;8843;8844 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
N2AB | 2873 | 8842;8843;8844 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
N2A | 2873 | 8842;8843;8844 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
N2B | 2827 | 8704;8705;8706 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
Novex-1 | 2827 | 8704;8705;8706 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
Novex-2 | 2827 | 8704;8705;8706 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
Novex-3 | 2873 | 8842;8843;8844 | chr2:178770084;178770083;178770082 | chr2:179634811;179634810;179634809 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.669 | D | 0.741 | 0.432 | 0.809333530915 | gnomAD-4.0.0 | 2.05218E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69787E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6668 | likely_pathogenic | 0.7361 | pathogenic | -1.921 | Destabilizing | 0.525 | D | 0.525 | neutral | None | None | None | None | N |
C/D | 0.9774 | likely_pathogenic | 0.9868 | pathogenic | -0.671 | Destabilizing | 0.949 | D | 0.799 | deleterious | None | None | None | None | N |
C/E | 0.9873 | likely_pathogenic | 0.9909 | pathogenic | -0.543 | Destabilizing | 0.949 | D | 0.801 | deleterious | None | None | None | None | N |
C/F | 0.7037 | likely_pathogenic | 0.7839 | pathogenic | -1.123 | Destabilizing | 0.989 | D | 0.799 | deleterious | D | 0.564733331 | None | None | N |
C/G | 0.4829 | ambiguous | 0.6247 | pathogenic | -2.255 | Highly Destabilizing | 0.669 | D | 0.741 | deleterious | D | 0.564733331 | None | None | N |
C/H | 0.9603 | likely_pathogenic | 0.9757 | pathogenic | -2.14 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
C/I | 0.8444 | likely_pathogenic | 0.8848 | pathogenic | -1.045 | Destabilizing | 0.949 | D | 0.772 | deleterious | None | None | None | None | N |
C/K | 0.9946 | likely_pathogenic | 0.9962 | pathogenic | -1.32 | Destabilizing | 0.949 | D | 0.798 | deleterious | None | None | None | None | N |
C/L | 0.8463 | likely_pathogenic | 0.8815 | pathogenic | -1.045 | Destabilizing | 0.842 | D | 0.678 | prob.neutral | None | None | None | None | N |
C/M | 0.8512 | likely_pathogenic | 0.8701 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
C/N | 0.9215 | likely_pathogenic | 0.951 | pathogenic | -1.366 | Destabilizing | 0.949 | D | 0.8 | deleterious | None | None | None | None | N |
C/P | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -1.312 | Destabilizing | 0.974 | D | 0.815 | deleterious | None | None | None | None | N |
C/Q | 0.9694 | likely_pathogenic | 0.9794 | pathogenic | -1.215 | Destabilizing | 0.974 | D | 0.831 | deleterious | None | None | None | None | N |
C/R | 0.9695 | likely_pathogenic | 0.9791 | pathogenic | -1.16 | Destabilizing | 0.934 | D | 0.823 | deleterious | N | 0.509067921 | None | None | N |
C/S | 0.5748 | likely_pathogenic | 0.7075 | pathogenic | -1.924 | Destabilizing | 0.051 | N | 0.473 | neutral | N | 0.459781244 | None | None | N |
C/T | 0.6359 | likely_pathogenic | 0.7039 | pathogenic | -1.61 | Destabilizing | 0.067 | N | 0.419 | neutral | None | None | None | None | N |
C/V | 0.6855 | likely_pathogenic | 0.7354 | pathogenic | -1.312 | Destabilizing | 0.842 | D | 0.688 | prob.neutral | None | None | None | None | N |
C/W | 0.9366 | likely_pathogenic | 0.9593 | pathogenic | -1.124 | Destabilizing | 0.997 | D | 0.767 | deleterious | D | 0.607828278 | None | None | N |
C/Y | 0.8547 | likely_pathogenic | 0.9085 | pathogenic | -1.149 | Destabilizing | 0.989 | D | 0.787 | deleterious | D | 0.541225595 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.