Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28735 | 86428;86429;86430 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
N2AB | 27094 | 81505;81506;81507 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
N2A | 26167 | 78724;78725;78726 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
N2B | 19670 | 59233;59234;59235 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
Novex-1 | 19795 | 59608;59609;59610 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
Novex-2 | 19862 | 59809;59810;59811 | chr2:178559929;178559928;178559927 | chr2:179424656;179424655;179424654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.006 | N | 0.099 | 0.038 | 0.0806252709748 | gnomAD-4.0.0 | 6.84249E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99476E-07 | 0 | 0 |
D/N | rs1703015531 | None | 0.822 | N | 0.574 | 0.217 | 0.215109475489 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1703015531 | None | 0.822 | N | 0.574 | 0.217 | 0.215109475489 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | I | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1958 | likely_benign | 0.1822 | benign | -0.303 | Destabilizing | 0.822 | D | 0.493 | neutral | N | 0.459393213 | None | None | I |
D/C | 0.6649 | likely_pathogenic | 0.6761 | pathogenic | 0.066 | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
D/E | 0.1129 | likely_benign | 0.1148 | benign | -0.369 | Destabilizing | 0.006 | N | 0.099 | neutral | N | 0.376371971 | None | None | I |
D/F | 0.5641 | likely_pathogenic | 0.5596 | ambiguous | -0.29 | Destabilizing | 0.993 | D | 0.616 | neutral | None | None | None | None | I |
D/G | 0.2968 | likely_benign | 0.2874 | benign | -0.497 | Destabilizing | 0.822 | D | 0.511 | neutral | N | 0.510763396 | None | None | I |
D/H | 0.4029 | ambiguous | 0.3814 | ambiguous | -0.165 | Destabilizing | 0.97 | D | 0.577 | neutral | D | 0.523020617 | None | None | I |
D/I | 0.3149 | likely_benign | 0.2906 | benign | 0.159 | Stabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | I |
D/K | 0.4276 | ambiguous | 0.4073 | ambiguous | 0.292 | Stabilizing | 0.754 | D | 0.47 | neutral | None | None | None | None | I |
D/L | 0.3402 | ambiguous | 0.306 | benign | 0.159 | Stabilizing | 0.956 | D | 0.52 | neutral | None | None | None | None | I |
D/M | 0.5357 | ambiguous | 0.5227 | ambiguous | 0.333 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | I |
D/N | 0.1559 | likely_benign | 0.1487 | benign | 0.033 | Stabilizing | 0.822 | D | 0.574 | neutral | N | 0.485753095 | None | None | I |
D/P | 0.5653 | likely_pathogenic | 0.5582 | ambiguous | 0.027 | Stabilizing | 0.978 | D | 0.571 | neutral | None | None | None | None | I |
D/Q | 0.3506 | ambiguous | 0.333 | benign | 0.046 | Stabilizing | 0.754 | D | 0.522 | neutral | None | None | None | None | I |
D/R | 0.5052 | ambiguous | 0.4879 | ambiguous | 0.438 | Stabilizing | 0.043 | N | 0.339 | neutral | None | None | None | None | I |
D/S | 0.1713 | likely_benign | 0.1596 | benign | -0.081 | Destabilizing | 0.86 | D | 0.465 | neutral | None | None | None | None | I |
D/T | 0.2907 | likely_benign | 0.2754 | benign | 0.066 | Stabilizing | 0.86 | D | 0.562 | neutral | None | None | None | None | I |
D/V | 0.2 | likely_benign | 0.1839 | benign | 0.027 | Stabilizing | 0.97 | D | 0.539 | neutral | N | 0.463761669 | None | None | I |
D/W | 0.8956 | likely_pathogenic | 0.905 | pathogenic | -0.167 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | I |
D/Y | 0.2742 | likely_benign | 0.2657 | benign | -0.052 | Destabilizing | 0.99 | D | 0.615 | neutral | N | 0.469976433 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.