Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28737 | 86434;86435;86436 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
N2AB | 27096 | 81511;81512;81513 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
N2A | 26169 | 78730;78731;78732 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
N2B | 19672 | 59239;59240;59241 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
Novex-1 | 19797 | 59614;59615;59616 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
Novex-2 | 19864 | 59815;59816;59817 | chr2:178559923;178559922;178559921 | chr2:179424650;179424649;179424648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.994 | D | 0.861 | 0.499 | 0.558070701127 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1387 | likely_benign | 0.1436 | benign | -0.757 | Destabilizing | 0.693 | D | 0.775 | deleterious | None | None | None | None | N |
S/C | 0.1857 | likely_benign | 0.1601 | benign | -0.841 | Destabilizing | 0.056 | N | 0.757 | deleterious | D | 0.542863747 | None | None | N |
S/D | 0.9746 | likely_pathogenic | 0.9655 | pathogenic | -1.629 | Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | N |
S/E | 0.9755 | likely_pathogenic | 0.9689 | pathogenic | -1.527 | Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
S/F | 0.8595 | likely_pathogenic | 0.8529 | pathogenic | -0.594 | Destabilizing | 0.987 | D | 0.881 | deleterious | None | None | None | None | N |
S/G | 0.2596 | likely_benign | 0.2253 | benign | -1.081 | Destabilizing | 0.944 | D | 0.811 | deleterious | N | 0.506121805 | None | None | N |
S/H | 0.9455 | likely_pathogenic | 0.935 | pathogenic | -1.467 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
S/I | 0.6718 | likely_pathogenic | 0.637 | pathogenic | 0.03 | Stabilizing | 0.967 | D | 0.88 | deleterious | D | 0.535773403 | None | None | N |
S/K | 0.9941 | likely_pathogenic | 0.9931 | pathogenic | -0.886 | Destabilizing | 0.987 | D | 0.836 | deleterious | None | None | None | None | N |
S/L | 0.467 | ambiguous | 0.4513 | ambiguous | 0.03 | Stabilizing | 0.845 | D | 0.855 | deleterious | None | None | None | None | N |
S/M | 0.645 | likely_pathogenic | 0.6365 | pathogenic | 0.079 | Stabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
S/N | 0.8212 | likely_pathogenic | 0.7955 | pathogenic | -1.28 | Destabilizing | 0.994 | D | 0.861 | deleterious | D | 0.553459584 | None | None | N |
S/P | 0.9646 | likely_pathogenic | 0.9638 | pathogenic | -0.198 | Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
S/Q | 0.9544 | likely_pathogenic | 0.9503 | pathogenic | -1.276 | Destabilizing | 0.996 | D | 0.85 | deleterious | None | None | None | None | N |
S/R | 0.9852 | likely_pathogenic | 0.9827 | pathogenic | -0.914 | Destabilizing | 0.994 | D | 0.845 | deleterious | D | 0.529986505 | None | None | N |
S/T | 0.2478 | likely_benign | 0.227 | benign | -1.018 | Destabilizing | 0.892 | D | 0.825 | deleterious | N | 0.518995366 | None | None | N |
S/V | 0.5534 | ambiguous | 0.5062 | ambiguous | -0.198 | Destabilizing | 0.975 | D | 0.866 | deleterious | None | None | None | None | N |
S/W | 0.9292 | likely_pathogenic | 0.9268 | pathogenic | -0.76 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
S/Y | 0.8768 | likely_pathogenic | 0.8695 | pathogenic | -0.405 | Destabilizing | 0.996 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.