Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28738 | 86437;86438;86439 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
N2AB | 27097 | 81514;81515;81516 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
N2A | 26170 | 78733;78734;78735 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
N2B | 19673 | 59242;59243;59244 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
Novex-1 | 19798 | 59617;59618;59619 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
Novex-2 | 19865 | 59818;59819;59820 | chr2:178559920;178559919;178559918 | chr2:179424647;179424646;179424645 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.181 | N | 0.541 | 0.148 | 0.186928172975 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1324 | likely_benign | 0.1271 | benign | -0.402 | Destabilizing | 0.044 | N | 0.528 | neutral | N | 0.426934078 | None | None | N |
D/C | 0.4748 | ambiguous | 0.4599 | ambiguous | 0.065 | Stabilizing | 0.96 | D | 0.659 | prob.neutral | None | None | None | None | N |
D/E | 0.1008 | likely_benign | 0.0978 | benign | -0.288 | Destabilizing | None | N | 0.189 | neutral | N | 0.392914718 | None | None | N |
D/F | 0.3948 | ambiguous | 0.3973 | ambiguous | -0.372 | Destabilizing | 0.864 | D | 0.619 | neutral | None | None | None | None | N |
D/G | 0.1841 | likely_benign | 0.184 | benign | -0.575 | Destabilizing | 0.181 | N | 0.541 | neutral | N | 0.472090364 | None | None | N |
D/H | 0.2769 | likely_benign | 0.2616 | benign | -0.2 | Destabilizing | 0.612 | D | 0.542 | neutral | N | 0.488041252 | None | None | N |
D/I | 0.1921 | likely_benign | 0.1783 | benign | 0.002 | Stabilizing | 0.676 | D | 0.658 | prob.neutral | None | None | None | None | N |
D/K | 0.3378 | likely_benign | 0.311 | benign | 0.396 | Stabilizing | 0.057 | N | 0.519 | neutral | None | None | None | None | N |
D/L | 0.2261 | likely_benign | 0.2088 | benign | 0.002 | Stabilizing | 0.227 | N | 0.645 | neutral | None | None | None | None | N |
D/M | 0.4095 | ambiguous | 0.4014 | ambiguous | 0.218 | Stabilizing | 0.96 | D | 0.627 | neutral | None | None | None | None | N |
D/N | 0.1061 | likely_benign | 0.1055 | benign | 0.068 | Stabilizing | 0.181 | N | 0.388 | neutral | N | 0.466087112 | None | None | N |
D/P | 0.3984 | ambiguous | 0.3916 | ambiguous | -0.113 | Destabilizing | None | N | 0.3 | neutral | None | None | None | None | N |
D/Q | 0.2758 | likely_benign | 0.2571 | benign | 0.084 | Stabilizing | 0.128 | N | 0.411 | neutral | None | None | None | None | N |
D/R | 0.4022 | ambiguous | 0.3807 | ambiguous | 0.5 | Stabilizing | 0.507 | D | 0.651 | prob.neutral | None | None | None | None | N |
D/S | 0.1129 | likely_benign | 0.1135 | benign | -0.021 | Destabilizing | 0.057 | N | 0.445 | neutral | None | None | None | None | N |
D/T | 0.1781 | likely_benign | 0.1731 | benign | 0.12 | Stabilizing | 0.227 | N | 0.563 | neutral | None | None | None | None | N |
D/V | 0.1295 | likely_benign | 0.1174 | benign | -0.113 | Destabilizing | 0.181 | N | 0.635 | neutral | N | 0.475650744 | None | None | N |
D/W | 0.8225 | likely_pathogenic | 0.817 | pathogenic | -0.22 | Destabilizing | 0.96 | D | 0.67 | prob.neutral | None | None | None | None | N |
D/Y | 0.1912 | likely_benign | 0.1841 | benign | -0.129 | Destabilizing | 0.828 | D | 0.619 | neutral | N | 0.499431681 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.