Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28742 | 86449;86450;86451 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
N2AB | 27101 | 81526;81527;81528 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
N2A | 26174 | 78745;78746;78747 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
N2B | 19677 | 59254;59255;59256 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
Novex-1 | 19802 | 59629;59630;59631 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
Novex-2 | 19869 | 59830;59831;59832 | chr2:178559908;178559907;178559906 | chr2:179424635;179424634;179424633 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.001 | N | 0.439 | 0.19 | 0.373173300195 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0711 | likely_benign | 0.0739 | benign | -0.725 | Destabilizing | 0.003 | N | 0.244 | neutral | N | 0.493193568 | None | None | N |
P/C | 0.3396 | likely_benign | 0.3624 | ambiguous | -0.596 | Destabilizing | 0.96 | D | 0.698 | prob.delet. | None | None | None | None | N |
P/D | 0.5126 | ambiguous | 0.4947 | ambiguous | -0.458 | Destabilizing | 0.373 | N | 0.525 | neutral | None | None | None | None | N |
P/E | 0.2991 | likely_benign | 0.2905 | benign | -0.557 | Destabilizing | 0.227 | N | 0.507 | neutral | None | None | None | None | N |
P/F | 0.3338 | likely_benign | 0.3378 | benign | -0.823 | Destabilizing | 0.34 | N | 0.709 | prob.delet. | None | None | None | None | N |
P/G | 0.2855 | likely_benign | 0.2756 | benign | -0.906 | Destabilizing | 0.227 | N | 0.549 | neutral | None | None | None | None | N |
P/H | 0.1657 | likely_benign | 0.1672 | benign | -0.445 | Destabilizing | 0.948 | D | 0.632 | neutral | N | 0.482441466 | None | None | N |
P/I | 0.1703 | likely_benign | 0.189 | benign | -0.386 | Destabilizing | 0.128 | N | 0.669 | prob.neutral | None | None | None | None | N |
P/K | 0.1976 | likely_benign | 0.2001 | benign | -0.584 | Destabilizing | 0.002 | N | 0.231 | neutral | None | None | None | None | N |
P/L | 0.0868 | likely_benign | 0.0958 | benign | -0.386 | Destabilizing | 0.001 | N | 0.439 | neutral | N | 0.511067253 | None | None | N |
P/M | 0.2277 | likely_benign | 0.2432 | benign | -0.297 | Destabilizing | 0.507 | D | 0.641 | neutral | None | None | None | None | N |
P/N | 0.3192 | likely_benign | 0.3176 | benign | -0.279 | Destabilizing | 0.676 | D | 0.621 | neutral | None | None | None | None | N |
P/Q | 0.1463 | likely_benign | 0.1453 | benign | -0.544 | Destabilizing | 0.507 | D | 0.55 | neutral | None | None | None | None | N |
P/R | 0.1328 | likely_benign | 0.1312 | benign | -0.022 | Destabilizing | 0.1 | N | 0.538 | neutral | N | 0.486960917 | None | None | N |
P/S | 0.1218 | likely_benign | 0.1198 | benign | -0.69 | Destabilizing | 0.1 | N | 0.516 | neutral | N | 0.506528225 | None | None | N |
P/T | 0.0874 | likely_benign | 0.0918 | benign | -0.688 | Destabilizing | 0.181 | N | 0.485 | neutral | N | 0.463323253 | None | None | N |
P/V | 0.1283 | likely_benign | 0.1378 | benign | -0.463 | Destabilizing | 0.128 | N | 0.547 | neutral | None | None | None | None | N |
P/W | 0.5828 | likely_pathogenic | 0.5605 | ambiguous | -0.906 | Destabilizing | 0.96 | D | 0.743 | deleterious | None | None | None | None | N |
P/Y | 0.3514 | ambiguous | 0.3465 | ambiguous | -0.611 | Destabilizing | 0.676 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.