Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28744 | 86455;86456;86457 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
N2AB | 27103 | 81532;81533;81534 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
N2A | 26176 | 78751;78752;78753 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
N2B | 19679 | 59260;59261;59262 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
Novex-1 | 19804 | 59635;59636;59637 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
Novex-2 | 19871 | 59836;59837;59838 | chr2:178559902;178559901;178559900 | chr2:179424629;179424628;179424627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.177 | N | 0.499 | 0.017 | 0.220303561663 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1284 | likely_benign | 0.1234 | benign | -1.333 | Destabilizing | 0.016 | N | 0.507 | neutral | None | None | None | None | N |
I/C | 0.4944 | ambiguous | 0.4837 | ambiguous | -0.833 | Destabilizing | 0.685 | D | 0.485 | neutral | None | None | None | None | N |
I/D | 0.4393 | ambiguous | 0.4248 | ambiguous | -0.748 | Destabilizing | 0.366 | N | 0.685 | prob.delet. | None | None | None | None | N |
I/E | 0.2804 | likely_benign | 0.2711 | benign | -0.796 | Destabilizing | 0.366 | N | 0.654 | prob.neutral | None | None | None | None | N |
I/F | 0.1143 | likely_benign | 0.107 | benign | -1.043 | Destabilizing | 0.221 | N | 0.411 | neutral | None | None | None | None | N |
I/G | 0.3821 | ambiguous | 0.3571 | ambiguous | -1.591 | Destabilizing | 0.366 | N | 0.631 | neutral | None | None | None | None | N |
I/H | 0.303 | likely_benign | 0.2923 | benign | -0.737 | Destabilizing | 0.869 | D | 0.64 | neutral | None | None | None | None | N |
I/K | 0.1845 | likely_benign | 0.1838 | benign | -0.825 | Destabilizing | 0.303 | N | 0.647 | neutral | N | 0.45388860600000003 | None | None | N |
I/L | 0.0877 | likely_benign | 0.0871 | benign | -0.733 | Destabilizing | None | N | 0.075 | neutral | N | 0.446479844 | None | None | N |
I/M | 0.0759 | likely_benign | 0.0745 | benign | -0.534 | Destabilizing | 0.177 | N | 0.499 | neutral | N | 0.454061964 | None | None | N |
I/N | 0.1754 | likely_benign | 0.1728 | benign | -0.615 | Destabilizing | 0.637 | D | 0.657 | prob.neutral | None | None | None | None | N |
I/P | 0.2816 | likely_benign | 0.2841 | benign | -0.9 | Destabilizing | 0.637 | D | 0.693 | prob.delet. | None | None | None | None | N |
I/Q | 0.2199 | likely_benign | 0.2125 | benign | -0.864 | Destabilizing | 0.637 | D | 0.631 | neutral | None | None | None | None | N |
I/R | 0.1532 | likely_benign | 0.1533 | benign | -0.164 | Destabilizing | 0.303 | N | 0.669 | prob.neutral | N | 0.491233485 | None | None | N |
I/S | 0.1611 | likely_benign | 0.1557 | benign | -1.183 | Destabilizing | 0.075 | N | 0.597 | neutral | None | None | None | None | N |
I/T | 0.0815 | likely_benign | 0.0794 | benign | -1.121 | Destabilizing | 0.03 | N | 0.538 | neutral | N | 0.408009095 | None | None | N |
I/V | 0.0583 | likely_benign | 0.0578 | benign | -0.9 | Destabilizing | None | N | 0.063 | neutral | N | 0.381295002 | None | None | N |
I/W | 0.584 | likely_pathogenic | 0.5539 | ambiguous | -1.046 | Destabilizing | 0.869 | D | 0.691 | prob.delet. | None | None | None | None | N |
I/Y | 0.3468 | ambiguous | 0.3242 | benign | -0.827 | Destabilizing | 0.366 | N | 0.536 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.