Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28745 | 86458;86459;86460 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
N2AB | 27104 | 81535;81536;81537 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
N2A | 26177 | 78754;78755;78756 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
N2B | 19680 | 59263;59264;59265 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
Novex-1 | 19805 | 59638;59639;59640 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
Novex-2 | 19872 | 59839;59840;59841 | chr2:178559899;178559898;178559897 | chr2:179424626;179424625;179424624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | None | -2.582 | 0.931 | N | 0.69 | 0.225 | 0.529011059296 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/E | None | -2.582 | 0.931 | N | 0.69 | 0.225 | 0.529011059296 | gnomAD-4.0.0 | 6.84387E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15977E-05 | 0 |
A/G | rs377367951 | -1.802 | 0.792 | N | 0.53 | 0.207 | None | gnomAD-2.1.1 | 3.58E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.41799E-04 | 3.13E-05 | 0 |
A/G | rs377367951 | -1.802 | 0.792 | N | 0.53 | 0.207 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 2.82646E-04 | 0 | 2.94E-05 | 0 | 0 |
A/G | rs377367951 | -1.802 | 0.792 | N | 0.53 | 0.207 | None | gnomAD-4.0.0 | 4.15309E-05 | None | None | None | None | N | None | 1.3359E-05 | 0 | None | 0 | 0 | None | 1.56882E-04 | 0 | 4.49252E-05 | 0 | 4.80338E-05 |
A/T | rs1423142304 | -1.723 | 0.027 | N | 0.342 | 0.157 | 0.272205846399 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/T | rs1423142304 | -1.723 | 0.027 | N | 0.342 | 0.157 | 0.272205846399 | gnomAD-4.0.0 | 6.36855E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73394E-05 | 0 |
A/V | rs377367951 | -0.61 | 0.027 | N | 0.347 | 0.115 | 0.385417323374 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
A/V | rs377367951 | -0.61 | 0.027 | N | 0.347 | 0.115 | 0.385417323374 | gnomAD-4.0.0 | 1.09502E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43921E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5642 | likely_pathogenic | 0.5914 | pathogenic | -2.251 | Highly Destabilizing | 0.998 | D | 0.705 | prob.delet. | None | None | None | None | N |
A/D | 0.9871 | likely_pathogenic | 0.988 | pathogenic | -3.095 | Highly Destabilizing | 0.947 | D | 0.759 | deleterious | None | None | None | None | N |
A/E | 0.965 | likely_pathogenic | 0.9711 | pathogenic | -2.924 | Highly Destabilizing | 0.931 | D | 0.69 | prob.delet. | N | 0.473517924 | None | None | N |
A/F | 0.8908 | likely_pathogenic | 0.8995 | pathogenic | -0.916 | Destabilizing | 0.947 | D | 0.751 | deleterious | None | None | None | None | N |
A/G | 0.4577 | ambiguous | 0.419 | ambiguous | -1.733 | Destabilizing | 0.792 | D | 0.53 | neutral | N | 0.485381208 | None | None | N |
A/H | 0.9837 | likely_pathogenic | 0.986 | pathogenic | -1.668 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
A/I | 0.3882 | ambiguous | 0.489 | ambiguous | -0.422 | Destabilizing | 0.466 | N | 0.648 | neutral | None | None | None | None | N |
A/K | 0.9886 | likely_pathogenic | 0.991 | pathogenic | -1.448 | Destabilizing | 0.947 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/L | 0.3932 | ambiguous | 0.4386 | ambiguous | -0.422 | Destabilizing | 0.717 | D | 0.572 | neutral | None | None | None | None | N |
A/M | 0.5975 | likely_pathogenic | 0.6391 | pathogenic | -1.123 | Destabilizing | 0.993 | D | 0.727 | deleterious | None | None | None | None | N |
A/N | 0.9345 | likely_pathogenic | 0.9402 | pathogenic | -1.927 | Destabilizing | 0.947 | D | 0.748 | deleterious | None | None | None | None | N |
A/P | 0.2952 | likely_benign | 0.3254 | benign | -0.706 | Destabilizing | 0.964 | D | 0.719 | prob.delet. | N | 0.504893429 | None | None | N |
A/Q | 0.9413 | likely_pathogenic | 0.9506 | pathogenic | -1.83 | Destabilizing | 0.973 | D | 0.685 | prob.delet. | None | None | None | None | N |
A/R | 0.9665 | likely_pathogenic | 0.9725 | pathogenic | -1.401 | Destabilizing | 0.947 | D | 0.693 | prob.delet. | None | None | None | None | N |
A/S | 0.2631 | likely_benign | 0.2624 | benign | -2.225 | Highly Destabilizing | 0.657 | D | 0.514 | neutral | N | 0.48462074 | None | None | N |
A/T | 0.2628 | likely_benign | 0.29 | benign | -1.95 | Destabilizing | 0.027 | N | 0.342 | neutral | N | 0.485462306 | None | None | N |
A/V | 0.1595 | likely_benign | 0.2372 | benign | -0.706 | Destabilizing | 0.027 | N | 0.347 | neutral | N | 0.480344488 | None | None | N |
A/W | 0.9894 | likely_pathogenic | 0.9902 | pathogenic | -1.444 | Destabilizing | 0.998 | D | 0.729 | deleterious | None | None | None | None | N |
A/Y | 0.9713 | likely_pathogenic | 0.973 | pathogenic | -1.042 | Destabilizing | 0.973 | D | 0.752 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.