Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28755 | 86488;86489;86490 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
N2AB | 27114 | 81565;81566;81567 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
N2A | 26187 | 78784;78785;78786 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
N2B | 19690 | 59293;59294;59295 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
Novex-1 | 19815 | 59668;59669;59670 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
Novex-2 | 19882 | 59869;59870;59871 | chr2:178559869;178559868;178559867 | chr2:179424596;179424595;179424594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1702996133 | None | 0.379 | N | 0.41 | 0.225 | 0.371531589858 | gnomAD-4.0.0 | 1.36965E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 0 |
D/V | None | None | 0.379 | N | 0.448 | 0.29 | 0.496165130923 | gnomAD-4.0.0 | 4.10895E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39696E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1976 | likely_benign | 0.2336 | benign | 0.003 | Stabilizing | 0.379 | N | 0.41 | neutral | N | 0.520740821 | None | None | I |
D/C | 0.5495 | ambiguous | 0.6257 | pathogenic | -0.126 | Destabilizing | 0.992 | D | 0.576 | neutral | None | None | None | None | I |
D/E | 0.1523 | likely_benign | 0.164 | benign | -0.295 | Destabilizing | 0.002 | N | 0.203 | neutral | N | 0.400548058 | None | None | I |
D/F | 0.5102 | ambiguous | 0.5658 | pathogenic | -0.034 | Destabilizing | 0.85 | D | 0.548 | neutral | None | None | None | None | I |
D/G | 0.2994 | likely_benign | 0.3324 | benign | -0.138 | Destabilizing | 0.549 | D | 0.397 | neutral | N | 0.502848493 | None | None | I |
D/H | 0.2755 | likely_benign | 0.3199 | benign | 0.471 | Stabilizing | 0.896 | D | 0.466 | neutral | N | 0.521780971 | None | None | I |
D/I | 0.2611 | likely_benign | 0.3051 | benign | 0.311 | Stabilizing | 0.739 | D | 0.493 | neutral | None | None | None | None | I |
D/K | 0.4881 | ambiguous | 0.555 | ambiguous | 0.381 | Stabilizing | 0.447 | N | 0.393 | neutral | None | None | None | None | I |
D/L | 0.3077 | likely_benign | 0.3659 | ambiguous | 0.311 | Stabilizing | 0.005 | N | 0.339 | neutral | None | None | None | None | I |
D/M | 0.5192 | ambiguous | 0.5983 | pathogenic | 0.111 | Stabilizing | 0.955 | D | 0.553 | neutral | None | None | None | None | I |
D/N | 0.1176 | likely_benign | 0.1335 | benign | 0.142 | Stabilizing | 0.549 | D | 0.423 | neutral | N | 0.521087538 | None | None | I |
D/P | 0.869 | likely_pathogenic | 0.8624 | pathogenic | 0.229 | Stabilizing | 0.92 | D | 0.451 | neutral | None | None | None | None | I |
D/Q | 0.3435 | ambiguous | 0.384 | ambiguous | 0.153 | Stabilizing | 0.739 | D | 0.391 | neutral | None | None | None | None | I |
D/R | 0.4976 | ambiguous | 0.5472 | ambiguous | 0.629 | Stabilizing | 0.85 | D | 0.494 | neutral | None | None | None | None | I |
D/S | 0.1499 | likely_benign | 0.1689 | benign | 0.045 | Stabilizing | 0.447 | N | 0.383 | neutral | None | None | None | None | I |
D/T | 0.2541 | likely_benign | 0.2994 | benign | 0.156 | Stabilizing | 0.617 | D | 0.403 | neutral | None | None | None | None | I |
D/V | 0.1646 | likely_benign | 0.1917 | benign | 0.229 | Stabilizing | 0.379 | N | 0.448 | neutral | N | 0.521434254 | None | None | I |
D/W | 0.8608 | likely_pathogenic | 0.8818 | pathogenic | 0.022 | Stabilizing | 0.992 | D | 0.643 | neutral | None | None | None | None | I |
D/Y | 0.2155 | likely_benign | 0.2439 | benign | 0.194 | Stabilizing | 0.963 | D | 0.549 | neutral | N | 0.521954329 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.