Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28758 | 86497;86498;86499 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
N2AB | 27117 | 81574;81575;81576 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
N2A | 26190 | 78793;78794;78795 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
N2B | 19693 | 59302;59303;59304 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
Novex-1 | 19818 | 59677;59678;59679 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
Novex-2 | 19885 | 59878;59879;59880 | chr2:178559860;178559859;178559858 | chr2:179424587;179424586;179424585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.027 | N | 0.342 | 0.194 | 0.173771789658 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0734 | likely_benign | 0.0706 | benign | -0.159 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
S/C | 0.1047 | likely_benign | 0.1082 | benign | -0.251 | Destabilizing | 0.78 | D | 0.375 | neutral | N | 0.484262733 | None | None | N |
S/D | 0.3162 | likely_benign | 0.3017 | benign | 0.07 | Stabilizing | 0.081 | N | 0.33 | neutral | None | None | None | None | N |
S/E | 0.4543 | ambiguous | 0.4443 | ambiguous | -0.029 | Destabilizing | 0.149 | N | 0.317 | neutral | None | None | None | None | N |
S/F | 0.2439 | likely_benign | 0.2254 | benign | -0.764 | Destabilizing | 0.555 | D | 0.445 | neutral | None | None | None | None | N |
S/G | 0.0679 | likely_benign | 0.0679 | benign | -0.257 | Destabilizing | 0.027 | N | 0.342 | neutral | N | 0.435007348 | None | None | N |
S/H | 0.3024 | likely_benign | 0.2886 | benign | -0.66 | Destabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | N |
S/I | 0.1358 | likely_benign | 0.1275 | benign | -0.036 | Destabilizing | 0.188 | N | 0.461 | neutral | N | 0.513102773 | None | None | N |
S/K | 0.545 | ambiguous | 0.5238 | ambiguous | -0.463 | Destabilizing | 0.149 | N | 0.317 | neutral | None | None | None | None | N |
S/L | 0.0988 | likely_benign | 0.0958 | benign | -0.036 | Destabilizing | 0.081 | N | 0.403 | neutral | None | None | None | None | N |
S/M | 0.1684 | likely_benign | 0.1633 | benign | 0.042 | Stabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | N |
S/N | 0.0929 | likely_benign | 0.0884 | benign | -0.147 | Destabilizing | None | N | 0.196 | neutral | N | 0.453073034 | None | None | N |
S/P | 0.1213 | likely_benign | 0.1143 | benign | -0.049 | Destabilizing | 0.555 | D | 0.399 | neutral | None | None | None | None | N |
S/Q | 0.4182 | ambiguous | 0.4043 | ambiguous | -0.386 | Destabilizing | 0.555 | D | 0.372 | neutral | None | None | None | None | N |
S/R | 0.4805 | ambiguous | 0.4619 | ambiguous | -0.205 | Destabilizing | 0.117 | N | 0.428 | neutral | N | 0.416093514 | None | None | N |
S/T | 0.0741 | likely_benign | 0.0685 | benign | -0.247 | Destabilizing | None | N | 0.211 | neutral | N | 0.493476862 | None | None | N |
S/V | 0.1455 | likely_benign | 0.1362 | benign | -0.049 | Destabilizing | 0.081 | N | 0.396 | neutral | None | None | None | None | N |
S/W | 0.3421 | ambiguous | 0.3388 | benign | -0.828 | Destabilizing | 0.935 | D | 0.494 | neutral | None | None | None | None | N |
S/Y | 0.2 | likely_benign | 0.1926 | benign | -0.528 | Destabilizing | 0.555 | D | 0.443 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.