Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28764 | 86515;86516;86517 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
N2AB | 27123 | 81592;81593;81594 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
N2A | 26196 | 78811;78812;78813 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
N2B | 19699 | 59320;59321;59322 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
Novex-1 | 19824 | 59695;59696;59697 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
Novex-2 | 19891 | 59896;59897;59898 | chr2:178559842;178559841;178559840 | chr2:179424569;179424568;179424567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.63 | N | 0.51 | 0.117 | 0.324986149311 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5604 | ambiguous | 0.5337 | ambiguous | -1.853 | Destabilizing | 0.916 | D | 0.569 | neutral | None | None | None | None | N |
L/C | 0.6501 | likely_pathogenic | 0.6477 | pathogenic | -1.234 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
L/D | 0.9531 | likely_pathogenic | 0.9504 | pathogenic | -1.441 | Destabilizing | 0.975 | D | 0.766 | deleterious | None | None | None | None | N |
L/E | 0.7464 | likely_pathogenic | 0.7356 | pathogenic | -1.349 | Destabilizing | 0.975 | D | 0.768 | deleterious | None | None | None | None | N |
L/F | 0.2198 | likely_benign | 0.2047 | benign | -1.131 | Destabilizing | 0.983 | D | 0.627 | neutral | N | 0.487342306 | None | None | N |
L/G | 0.9054 | likely_pathogenic | 0.8947 | pathogenic | -2.253 | Highly Destabilizing | 0.975 | D | 0.767 | deleterious | None | None | None | None | N |
L/H | 0.4205 | ambiguous | 0.4112 | ambiguous | -1.344 | Destabilizing | 0.154 | N | 0.556 | neutral | None | None | None | None | N |
L/I | 0.1037 | likely_benign | 0.0961 | benign | -0.784 | Destabilizing | 0.253 | N | 0.366 | neutral | None | None | None | None | N |
L/K | 0.5344 | ambiguous | 0.5384 | ambiguous | -1.386 | Destabilizing | 0.975 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/M | 0.1234 | likely_benign | 0.1214 | benign | -0.716 | Destabilizing | 0.983 | D | 0.64 | neutral | N | 0.485189485 | None | None | N |
L/N | 0.7669 | likely_pathogenic | 0.7573 | pathogenic | -1.423 | Destabilizing | 0.975 | D | 0.774 | deleterious | None | None | None | None | N |
L/P | 0.9643 | likely_pathogenic | 0.9547 | pathogenic | -1.113 | Destabilizing | 0.996 | D | 0.776 | deleterious | None | None | None | None | N |
L/Q | 0.334 | likely_benign | 0.3311 | benign | -1.464 | Destabilizing | 0.975 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/R | 0.422 | ambiguous | 0.4266 | ambiguous | -0.882 | Destabilizing | 0.975 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/S | 0.7086 | likely_pathogenic | 0.6828 | pathogenic | -2.07 | Highly Destabilizing | 0.967 | D | 0.687 | prob.neutral | N | 0.505193071 | None | None | N |
L/T | 0.5159 | ambiguous | 0.4965 | ambiguous | -1.84 | Destabilizing | 0.987 | D | 0.658 | neutral | None | None | None | None | N |
L/V | 0.1015 | likely_benign | 0.0992 | benign | -1.113 | Destabilizing | 0.63 | D | 0.51 | neutral | N | 0.473795023 | None | None | N |
L/W | 0.4804 | ambiguous | 0.4733 | ambiguous | -1.266 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | D | 0.524818263 | None | None | N |
L/Y | 0.526 | ambiguous | 0.5133 | ambiguous | -1.023 | Destabilizing | 0.95 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.