Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2877 | 8854;8855;8856 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
N2AB | 2877 | 8854;8855;8856 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
N2A | 2877 | 8854;8855;8856 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
N2B | 2831 | 8716;8717;8718 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
Novex-1 | 2831 | 8716;8717;8718 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
Novex-2 | 2831 | 8716;8717;8718 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
Novex-3 | 2877 | 8854;8855;8856 | chr2:178770072;178770071;178770070 | chr2:179634799;179634798;179634797 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | D | 0.918 | 0.676 | 0.82818415665 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9566 | likely_pathogenic | 0.9622 | pathogenic | -2.812 | Highly Destabilizing | 0.997 | D | 0.75 | deleterious | None | None | None | None | N |
L/C | 0.9347 | likely_pathogenic | 0.9416 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.426 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
L/E | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -3.094 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/F | 0.9329 | likely_pathogenic | 0.929 | pathogenic | -1.7 | Destabilizing | 0.538 | D | 0.44 | neutral | None | None | None | None | N |
L/G | 0.9945 | likely_pathogenic | 0.9946 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/H | 0.9975 | likely_pathogenic | 0.9968 | pathogenic | -3.137 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/I | 0.2771 | likely_benign | 0.2986 | benign | -0.946 | Destabilizing | 0.994 | D | 0.581 | neutral | None | None | None | None | N |
L/K | 0.9986 | likely_pathogenic | 0.9977 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/M | 0.5883 | likely_pathogenic | 0.602 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.677741753 | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9978 | pathogenic | -2.789 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
L/P | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.717937041 | None | None | N |
L/Q | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | D | 0.717937041 | None | None | N |
L/R | 0.9957 | likely_pathogenic | 0.994 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | D | 0.717937041 | None | None | N |
L/S | 0.9972 | likely_pathogenic | 0.997 | pathogenic | -3.326 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/T | 0.9806 | likely_pathogenic | 0.9797 | pathogenic | -2.828 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/V | 0.2736 | likely_benign | 0.3099 | benign | -1.561 | Destabilizing | 0.992 | D | 0.585 | neutral | D | 0.582691199 | None | None | N |
L/W | 0.9966 | likely_pathogenic | 0.9956 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Y | 0.9926 | likely_pathogenic | 0.9915 | pathogenic | -1.902 | Destabilizing | 0.996 | D | 0.884 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.