Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28773 | 86542;86543;86544 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
N2AB | 27132 | 81619;81620;81621 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
N2A | 26205 | 78838;78839;78840 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
N2B | 19708 | 59347;59348;59349 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
Novex-1 | 19833 | 59722;59723;59724 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
Novex-2 | 19900 | 59923;59924;59925 | chr2:178559815;178559814;178559813 | chr2:179424542;179424541;179424540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.63 | N | 0.457 | 0.225 | 0.20549828249 | gnomAD-4.0.0 | 1.59991E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43658E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1117 | likely_benign | 0.1222 | benign | -0.842 | Destabilizing | 0.63 | D | 0.457 | neutral | N | 0.48137092 | None | None | N |
T/C | 0.3188 | likely_benign | 0.3886 | ambiguous | -0.448 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
T/D | 0.601 | likely_pathogenic | 0.663 | pathogenic | 0.345 | Stabilizing | 0.975 | D | 0.628 | neutral | None | None | None | None | N |
T/E | 0.3954 | ambiguous | 0.4543 | ambiguous | 0.327 | Stabilizing | 0.975 | D | 0.617 | neutral | None | None | None | None | N |
T/F | 0.3313 | likely_benign | 0.3833 | ambiguous | -1.146 | Destabilizing | 0.975 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/G | 0.3701 | ambiguous | 0.4081 | ambiguous | -1.051 | Destabilizing | 0.916 | D | 0.576 | neutral | None | None | None | None | N |
T/H | 0.2235 | likely_benign | 0.2623 | benign | -1.304 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/I | 0.1977 | likely_benign | 0.2268 | benign | -0.388 | Destabilizing | 0.805 | D | 0.547 | neutral | N | 0.497980526 | None | None | N |
T/K | 0.2204 | likely_benign | 0.2704 | benign | -0.429 | Destabilizing | 0.975 | D | 0.617 | neutral | None | None | None | None | N |
T/L | 0.1468 | likely_benign | 0.1635 | benign | -0.388 | Destabilizing | 0.845 | D | 0.503 | neutral | None | None | None | None | N |
T/M | 0.1111 | likely_benign | 0.1183 | benign | -0.132 | Destabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
T/N | 0.1802 | likely_benign | 0.1999 | benign | -0.328 | Destabilizing | 0.967 | D | 0.549 | neutral | N | 0.466793614 | None | None | N |
T/P | 0.6511 | likely_pathogenic | 0.6397 | pathogenic | -0.509 | Destabilizing | 0.983 | D | 0.663 | neutral | N | 0.482384879 | None | None | N |
T/Q | 0.203 | likely_benign | 0.2337 | benign | -0.474 | Destabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | N |
T/R | 0.1571 | likely_benign | 0.1951 | benign | -0.242 | Destabilizing | 0.987 | D | 0.659 | neutral | None | None | None | None | N |
T/S | 0.1181 | likely_benign | 0.1296 | benign | -0.677 | Destabilizing | 0.243 | N | 0.403 | neutral | N | 0.493478783 | None | None | N |
T/V | 0.1493 | likely_benign | 0.1646 | benign | -0.509 | Destabilizing | 0.033 | N | 0.391 | neutral | None | None | None | None | N |
T/W | 0.6651 | likely_pathogenic | 0.7197 | pathogenic | -1.059 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/Y | 0.3391 | likely_benign | 0.3845 | ambiguous | -0.807 | Destabilizing | 0.987 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.