Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28778 | 86557;86558;86559 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
N2AB | 27137 | 81634;81635;81636 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
N2A | 26210 | 78853;78854;78855 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
N2B | 19713 | 59362;59363;59364 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
Novex-1 | 19838 | 59737;59738;59739 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
Novex-2 | 19905 | 59938;59939;59940 | chr2:178559800;178559799;178559798 | chr2:179424527;179424526;179424525 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 0.805 | N | 0.735 | 0.355 | 0.53832913131 | gnomAD-4.0.0 | 1.37279E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80095E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9711 | likely_pathogenic | 0.958 | pathogenic | -2.701 | Highly Destabilizing | 0.845 | D | 0.707 | prob.neutral | None | None | None | None | I |
F/C | 0.7162 | likely_pathogenic | 0.6536 | pathogenic | -1.537 | Destabilizing | 0.999 | D | 0.775 | deleterious | N | 0.509495031 | None | None | I |
F/D | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -2.126 | Highly Destabilizing | 0.975 | D | 0.819 | deleterious | None | None | None | None | I |
F/E | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -1.998 | Destabilizing | 0.975 | D | 0.817 | deleterious | None | None | None | None | I |
F/G | 0.9917 | likely_pathogenic | 0.9885 | pathogenic | -3.086 | Highly Destabilizing | 0.975 | D | 0.805 | deleterious | None | None | None | None | I |
F/H | 0.9626 | likely_pathogenic | 0.9513 | pathogenic | -1.368 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | I |
F/I | 0.5395 | ambiguous | 0.4591 | ambiguous | -1.497 | Destabilizing | 0.892 | D | 0.697 | prob.neutral | N | 0.42024854 | None | None | I |
F/K | 0.9968 | likely_pathogenic | 0.9959 | pathogenic | -1.75 | Destabilizing | 0.975 | D | 0.817 | deleterious | None | None | None | None | I |
F/L | 0.9621 | likely_pathogenic | 0.9479 | pathogenic | -1.497 | Destabilizing | 0.805 | D | 0.642 | neutral | N | 0.511873408 | None | None | I |
F/M | 0.865 | likely_pathogenic | 0.8243 | pathogenic | -1.136 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | I |
F/N | 0.9935 | likely_pathogenic | 0.9911 | pathogenic | -1.904 | Destabilizing | 0.975 | D | 0.823 | deleterious | None | None | None | None | I |
F/P | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -1.9 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | I |
F/Q | 0.9933 | likely_pathogenic | 0.9908 | pathogenic | -1.984 | Destabilizing | 0.987 | D | 0.823 | deleterious | None | None | None | None | I |
F/R | 0.9913 | likely_pathogenic | 0.9886 | pathogenic | -1.047 | Destabilizing | 0.975 | D | 0.824 | deleterious | None | None | None | None | I |
F/S | 0.9671 | likely_pathogenic | 0.9527 | pathogenic | -2.661 | Highly Destabilizing | 0.805 | D | 0.756 | deleterious | N | 0.486110857 | None | None | I |
F/T | 0.977 | likely_pathogenic | 0.9674 | pathogenic | -2.436 | Highly Destabilizing | 0.033 | N | 0.512 | neutral | None | None | None | None | I |
F/V | 0.5425 | ambiguous | 0.4735 | ambiguous | -1.9 | Destabilizing | 0.805 | D | 0.735 | prob.delet. | N | 0.422203049 | None | None | I |
F/W | 0.8177 | likely_pathogenic | 0.7847 | pathogenic | -0.505 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
F/Y | 0.3277 | likely_benign | 0.307 | benign | -0.799 | Destabilizing | 0.981 | D | 0.631 | neutral | N | 0.502216562 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.