Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28787 | 86584;86585;86586 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
N2AB | 27146 | 81661;81662;81663 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
N2A | 26219 | 78880;78881;78882 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
N2B | 19722 | 59389;59390;59391 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
Novex-1 | 19847 | 59764;59765;59766 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
Novex-2 | 19914 | 59965;59966;59967 | chr2:178559773;178559772;178559771 | chr2:179424500;179424499;179424498 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1237283720 | -1.053 | None | N | 0.256 | 0.105 | 0.181679512989 | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.13E-06 | 0 |
L/S | rs1237283720 | -1.053 | None | N | 0.256 | 0.105 | 0.181679512989 | gnomAD-4.0.0 | 1.61777E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0939 | likely_benign | 0.0931 | benign | -0.896 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
L/C | 0.2469 | likely_benign | 0.2463 | benign | -0.791 | Destabilizing | 0.245 | N | 0.449 | neutral | None | None | None | None | N |
L/D | 0.3859 | ambiguous | 0.3616 | ambiguous | -0.147 | Destabilizing | 0.009 | N | 0.477 | neutral | None | None | None | None | N |
L/E | 0.2106 | likely_benign | 0.1943 | benign | -0.179 | Destabilizing | 0.009 | N | 0.421 | neutral | None | None | None | None | N |
L/F | 0.0776 | likely_benign | 0.0744 | benign | -0.61 | Destabilizing | 0.033 | N | 0.36 | neutral | N | 0.441880179 | None | None | N |
L/G | 0.2853 | likely_benign | 0.2777 | benign | -1.134 | Destabilizing | 0.009 | N | 0.4 | neutral | None | None | None | None | N |
L/H | 0.1044 | likely_benign | 0.1016 | benign | -0.256 | Destabilizing | 0.245 | N | 0.498 | neutral | None | None | None | None | N |
L/I | 0.0607 | likely_benign | 0.0596 | benign | -0.359 | Destabilizing | None | N | 0.15 | neutral | None | None | None | None | N |
L/K | 0.1786 | likely_benign | 0.1692 | benign | -0.522 | Destabilizing | 0.009 | N | 0.409 | neutral | None | None | None | None | N |
L/M | 0.0639 | likely_benign | 0.0636 | benign | -0.506 | Destabilizing | None | N | 0.147 | neutral | N | 0.436858362 | None | None | N |
L/N | 0.1427 | likely_benign | 0.1426 | benign | -0.431 | Destabilizing | 0.022 | N | 0.513 | neutral | None | None | None | None | N |
L/P | 0.8807 | likely_pathogenic | 0.8733 | pathogenic | -0.505 | Destabilizing | 0.044 | N | 0.551 | neutral | None | None | None | None | N |
L/Q | 0.082 | likely_benign | 0.0797 | benign | -0.566 | Destabilizing | 0.001 | N | 0.29 | neutral | None | None | None | None | N |
L/R | 0.1433 | likely_benign | 0.1331 | benign | -0.007 | Destabilizing | 0.022 | N | 0.512 | neutral | None | None | None | None | N |
L/S | 0.0786 | likely_benign | 0.0792 | benign | -0.983 | Destabilizing | None | N | 0.256 | neutral | N | 0.402105496 | None | None | N |
L/T | 0.0669 | likely_benign | 0.0688 | benign | -0.892 | Destabilizing | None | N | 0.195 | neutral | None | None | None | None | N |
L/V | 0.0618 | likely_benign | 0.0604 | benign | -0.505 | Destabilizing | None | N | 0.119 | neutral | N | 0.409594403 | None | None | N |
L/W | 0.1713 | likely_benign | 0.1623 | benign | -0.642 | Destabilizing | 0.737 | D | 0.501 | neutral | N | 0.485150954 | None | None | N |
L/Y | 0.185 | likely_benign | 0.1755 | benign | -0.403 | Destabilizing | 0.085 | N | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.