Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2879 | 8860;8861;8862 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
N2AB | 2879 | 8860;8861;8862 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
N2A | 2879 | 8860;8861;8862 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
N2B | 2833 | 8722;8723;8724 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
Novex-1 | 2833 | 8722;8723;8724 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
Novex-2 | 2833 | 8722;8723;8724 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
Novex-3 | 2879 | 8860;8861;8862 | chr2:178770066;178770065;178770064 | chr2:179634793;179634792;179634791 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.529 | 0.676 | 0.692093607395 | gnomAD-4.0.0 | 1.59047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8079 | likely_pathogenic | 0.8187 | pathogenic | -1.772 | Destabilizing | 0.999 | D | 0.529 | neutral | D | 0.698542044 | None | None | N |
V/C | 0.9646 | likely_pathogenic | 0.9667 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/D | 0.997 | likely_pathogenic | 0.9965 | pathogenic | -1.978 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
V/E | 0.9883 | likely_pathogenic | 0.9876 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.700784897 | None | None | N |
V/F | 0.9201 | likely_pathogenic | 0.9105 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/G | 0.9409 | likely_pathogenic | 0.9402 | pathogenic | -2.134 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.700784897 | None | None | N |
V/H | 0.9966 | likely_pathogenic | 0.9964 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/I | 0.1188 | likely_benign | 0.1202 | benign | -0.846 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
V/K | 0.9898 | likely_pathogenic | 0.9886 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/L | 0.7361 | likely_pathogenic | 0.752 | pathogenic | -0.846 | Destabilizing | 0.997 | D | 0.507 | neutral | D | 0.635606197 | None | None | N |
V/M | 0.7491 | likely_pathogenic | 0.7653 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | D | 0.70015623 | None | None | N |
V/N | 0.9896 | likely_pathogenic | 0.9892 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/P | 0.9819 | likely_pathogenic | 0.9793 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/Q | 0.9855 | likely_pathogenic | 0.986 | pathogenic | -1.494 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/R | 0.9811 | likely_pathogenic | 0.9792 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/S | 0.9336 | likely_pathogenic | 0.9403 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/T | 0.7488 | likely_pathogenic | 0.7687 | pathogenic | -1.735 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
V/W | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/Y | 0.9936 | likely_pathogenic | 0.9935 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.