Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28810 | 86653;86654;86655 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
N2AB | 27169 | 81730;81731;81732 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
N2A | 26242 | 78949;78950;78951 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
N2B | 19745 | 59458;59459;59460 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
Novex-1 | 19870 | 59833;59834;59835 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
Novex-2 | 19937 | 60034;60035;60036 | chr2:178559704;178559703;178559702 | chr2:179424431;179424430;179424429 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.248 | N | 0.39 | 0.333 | 0.56731557318 | gnomAD-4.0.0 | 2.06226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70698E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9274 | likely_pathogenic | 0.9178 | pathogenic | -2.148 | Highly Destabilizing | 0.97 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/C | 0.8336 | likely_pathogenic | 0.8289 | pathogenic | -1.615 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -2.861 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
L/E | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -2.532 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.3708 | ambiguous | 0.3384 | benign | -1.316 | Destabilizing | 0.996 | D | 0.686 | prob.neutral | None | None | None | None | N |
L/G | 0.9925 | likely_pathogenic | 0.9915 | pathogenic | -2.77 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9858 | likely_pathogenic | 0.9858 | pathogenic | -2.752 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/I | 0.1208 | likely_benign | 0.117 | benign | -0.285 | Destabilizing | 0.155 | N | 0.329 | neutral | None | None | None | None | N |
L/K | 0.9936 | likely_pathogenic | 0.9941 | pathogenic | -1.503 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
L/M | 0.2126 | likely_benign | 0.1876 | benign | -0.604 | Destabilizing | 0.994 | D | 0.678 | prob.neutral | N | 0.514305467 | None | None | N |
L/N | 0.9967 | likely_pathogenic | 0.9966 | pathogenic | -2.222 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.895 | Destabilizing | 0.998 | D | 0.827 | deleterious | D | 0.553680756 | None | None | N |
L/Q | 0.9827 | likely_pathogenic | 0.983 | pathogenic | -1.812 | Destabilizing | 0.998 | D | 0.813 | deleterious | D | 0.553680756 | None | None | N |
L/R | 0.9861 | likely_pathogenic | 0.9874 | pathogenic | -1.81 | Destabilizing | 0.998 | D | 0.798 | deleterious | D | 0.54232445 | None | None | N |
L/S | 0.9916 | likely_pathogenic | 0.9903 | pathogenic | -2.785 | Highly Destabilizing | 0.996 | D | 0.795 | deleterious | None | None | None | None | N |
L/T | 0.9681 | likely_pathogenic | 0.9656 | pathogenic | -2.273 | Highly Destabilizing | 0.97 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/V | 0.1406 | likely_benign | 0.1422 | benign | -0.895 | Destabilizing | 0.248 | N | 0.39 | neutral | N | 0.499568574 | None | None | N |
L/W | 0.9351 | likely_pathogenic | 0.9312 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/Y | 0.9358 | likely_pathogenic | 0.9285 | pathogenic | -1.445 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.