Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28816 | 86671;86672;86673 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
N2AB | 27175 | 81748;81749;81750 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
N2A | 26248 | 78967;78968;78969 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
N2B | 19751 | 59476;59477;59478 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
Novex-1 | 19876 | 59851;59852;59853 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
Novex-2 | 19943 | 60052;60053;60054 | chr2:178559686;178559685;178559684 | chr2:179424413;179424412;179424411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs774349799 | 0.146 | 0.324 | N | 0.237 | 0.189 | 0.232513804876 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs774349799 | 0.146 | 0.324 | N | 0.237 | 0.189 | 0.232513804876 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.2068E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs774349799 | 0.146 | 0.324 | N | 0.237 | 0.189 | 0.232513804876 | gnomAD-4.0.0 | 3.72583E-06 | None | None | None | None | N | None | 8.01967E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1897 | likely_benign | 0.1821 | benign | -0.485 | Destabilizing | 0.116 | N | 0.34 | neutral | None | None | None | None | N |
N/C | 0.1973 | likely_benign | 0.1948 | benign | 0.293 | Stabilizing | 0.981 | D | 0.425 | neutral | None | None | None | None | N |
N/D | 0.0894 | likely_benign | 0.1022 | benign | -0.834 | Destabilizing | 0.324 | N | 0.263 | neutral | D | 0.523149195 | None | None | N |
N/E | 0.3729 | ambiguous | 0.3883 | ambiguous | -0.832 | Destabilizing | 0.241 | N | 0.237 | neutral | None | None | None | None | N |
N/F | 0.4885 | ambiguous | 0.4742 | ambiguous | -0.721 | Destabilizing | 0.69 | D | 0.429 | neutral | None | None | None | None | N |
N/G | 0.1962 | likely_benign | 0.1906 | benign | -0.716 | Destabilizing | 0.207 | N | 0.241 | neutral | None | None | None | None | N |
N/H | 0.1199 | likely_benign | 0.1197 | benign | -0.787 | Destabilizing | 0.003 | N | 0.229 | neutral | D | 0.530288598 | None | None | N |
N/I | 0.2661 | likely_benign | 0.2455 | benign | 0.056 | Stabilizing | 0.457 | N | 0.408 | neutral | N | 0.495531832 | None | None | N |
N/K | 0.3251 | likely_benign | 0.3425 | ambiguous | -0.08 | Destabilizing | 0.324 | N | 0.237 | neutral | N | 0.501829773 | None | None | N |
N/L | 0.2117 | likely_benign | 0.2037 | benign | 0.056 | Stabilizing | 0.241 | N | 0.368 | neutral | None | None | None | None | N |
N/M | 0.2887 | likely_benign | 0.2819 | benign | 0.728 | Stabilizing | 0.944 | D | 0.395 | neutral | None | None | None | None | N |
N/P | 0.821 | likely_pathogenic | 0.8065 | pathogenic | -0.097 | Destabilizing | 0.818 | D | 0.369 | neutral | None | None | None | None | N |
N/Q | 0.3192 | likely_benign | 0.3226 | benign | -0.808 | Destabilizing | 0.69 | D | 0.342 | neutral | None | None | None | None | N |
N/R | 0.3637 | ambiguous | 0.38 | ambiguous | 0.068 | Stabilizing | 0.388 | N | 0.302 | neutral | None | None | None | None | N |
N/S | 0.0601 | likely_benign | 0.0612 | benign | -0.435 | Destabilizing | 0.09 | N | 0.322 | neutral | N | 0.469912143 | None | None | N |
N/T | 0.075 | likely_benign | 0.08 | benign | -0.289 | Destabilizing | None | N | 0.123 | neutral | N | 0.446843282 | None | None | N |
N/V | 0.2135 | likely_benign | 0.1989 | benign | -0.097 | Destabilizing | 0.241 | N | 0.375 | neutral | None | None | None | None | N |
N/W | 0.7847 | likely_pathogenic | 0.7803 | pathogenic | -0.614 | Destabilizing | 0.981 | D | 0.505 | neutral | None | None | None | None | N |
N/Y | 0.2147 | likely_benign | 0.213 | benign | -0.346 | Destabilizing | 0.457 | N | 0.391 | neutral | N | 0.502279782 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.