Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2882 | 8869;8870;8871 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
N2AB | 2882 | 8869;8870;8871 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
N2A | 2882 | 8869;8870;8871 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
N2B | 2836 | 8731;8732;8733 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
Novex-1 | 2836 | 8731;8732;8733 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
Novex-2 | 2836 | 8731;8732;8733 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
Novex-3 | 2882 | 8869;8870;8871 | chr2:178769937;178769936;178769935 | chr2:179634664;179634663;179634662 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.046 | N | 0.28 | 0.071 | 0.482500522706 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5562 | ambiguous | 0.5351 | ambiguous | -0.524 | Destabilizing | 0.91 | D | 0.481 | neutral | None | None | None | None | N |
L/C | 0.7688 | likely_pathogenic | 0.7801 | pathogenic | 0.03 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
L/D | 0.9637 | likely_pathogenic | 0.9515 | pathogenic | -0.471 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/E | 0.8077 | likely_pathogenic | 0.7822 | pathogenic | -0.56 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/F | 0.4722 | ambiguous | 0.446 | ambiguous | -0.669 | Destabilizing | 0.982 | D | 0.547 | neutral | D | 0.565786243 | None | None | N |
L/G | 0.8786 | likely_pathogenic | 0.8618 | pathogenic | -0.699 | Destabilizing | 0.993 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/H | 0.6991 | likely_pathogenic | 0.6684 | pathogenic | -0.292 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/I | 0.1012 | likely_benign | 0.1014 | benign | -0.171 | Destabilizing | 0.046 | N | 0.295 | neutral | N | 0.45486183 | None | None | N |
L/K | 0.6483 | likely_pathogenic | 0.6404 | pathogenic | -0.169 | Destabilizing | 0.993 | D | 0.64 | neutral | None | None | None | None | N |
L/M | 0.1904 | likely_benign | 0.2022 | benign | -0.122 | Destabilizing | 0.986 | D | 0.551 | neutral | None | None | None | None | N |
L/N | 0.8096 | likely_pathogenic | 0.7816 | pathogenic | 0.31 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/P | 0.6181 | likely_pathogenic | 0.5484 | ambiguous | -0.258 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/Q | 0.507 | ambiguous | 0.491 | ambiguous | 0.066 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
L/R | 0.5448 | ambiguous | 0.5144 | ambiguous | 0.281 | Stabilizing | 0.993 | D | 0.65 | neutral | None | None | None | None | N |
L/S | 0.73 | likely_pathogenic | 0.6796 | pathogenic | -0.007 | Destabilizing | 0.991 | D | 0.638 | neutral | D | 0.56462952 | None | None | N |
L/T | 0.5063 | ambiguous | 0.4747 | ambiguous | None | Stabilizing | 0.986 | D | 0.506 | neutral | None | None | None | None | N |
L/V | 0.1034 | likely_benign | 0.0984 | benign | -0.258 | Destabilizing | 0.046 | N | 0.28 | neutral | N | 0.492885905 | None | None | N |
L/W | 0.7333 | likely_pathogenic | 0.7161 | pathogenic | -0.755 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
L/Y | 0.785 | likely_pathogenic | 0.7899 | pathogenic | -0.473 | Destabilizing | 0.993 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.