Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28825 | 86698;86699;86700 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
N2AB | 27184 | 81775;81776;81777 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
N2A | 26257 | 78994;78995;78996 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
N2B | 19760 | 59503;59504;59505 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
Novex-1 | 19885 | 59878;59879;59880 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
Novex-2 | 19952 | 60079;60080;60081 | chr2:178559659;178559658;178559657 | chr2:179424386;179424385;179424384 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.994 | N | 0.689 | 0.319 | 0.492816438443 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43583E-05 | 0 |
L/I | rs1575605256 | None | 0.248 | N | 0.387 | 0.05 | 0.171388866994 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43579E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7164 | likely_pathogenic | 0.6753 | pathogenic | -2.375 | Highly Destabilizing | 0.97 | D | 0.744 | deleterious | None | None | None | None | N |
L/C | 0.7511 | likely_pathogenic | 0.7451 | pathogenic | -2.039 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -2.389 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
L/E | 0.9948 | likely_pathogenic | 0.9934 | pathogenic | -2.139 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
L/F | 0.6902 | likely_pathogenic | 0.654 | pathogenic | -1.449 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | N | 0.462617874 | None | None | N |
L/G | 0.9689 | likely_pathogenic | 0.9599 | pathogenic | -2.954 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9894 | likely_pathogenic | 0.9864 | pathogenic | -2.5 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/I | 0.0891 | likely_benign | 0.0863 | benign | -0.698 | Destabilizing | 0.248 | N | 0.387 | neutral | N | 0.46448124 | None | None | N |
L/K | 0.9936 | likely_pathogenic | 0.9919 | pathogenic | -1.696 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
L/M | 0.2246 | likely_benign | 0.2024 | benign | -0.906 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | N |
L/N | 0.9939 | likely_pathogenic | 0.9915 | pathogenic | -2.086 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
L/P | 0.9943 | likely_pathogenic | 0.9931 | pathogenic | -1.238 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
L/Q | 0.9759 | likely_pathogenic | 0.9694 | pathogenic | -1.879 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
L/R | 0.9855 | likely_pathogenic | 0.9823 | pathogenic | -1.592 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/S | 0.9725 | likely_pathogenic | 0.9626 | pathogenic | -2.877 | Highly Destabilizing | 0.994 | D | 0.813 | deleterious | N | 0.493599372 | None | None | N |
L/T | 0.8671 | likely_pathogenic | 0.8466 | pathogenic | -2.457 | Highly Destabilizing | 0.97 | D | 0.769 | deleterious | None | None | None | None | N |
L/V | 0.0657 | likely_benign | 0.0665 | benign | -1.238 | Destabilizing | 0.122 | N | 0.37 | neutral | N | 0.439814869 | None | None | N |
L/W | 0.9797 | likely_pathogenic | 0.9736 | pathogenic | -1.779 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/Y | 0.976 | likely_pathogenic | 0.9703 | pathogenic | -1.478 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.