Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2883 | 8872;8873;8874 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
N2AB | 2883 | 8872;8873;8874 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
N2A | 2883 | 8872;8873;8874 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
N2B | 2837 | 8734;8735;8736 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
Novex-1 | 2837 | 8734;8735;8736 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
Novex-2 | 2837 | 8734;8735;8736 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
Novex-3 | 2883 | 8872;8873;8874 | chr2:178769934;178769933;178769932 | chr2:179634661;179634660;179634659 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs763935915 | 0.374 | 0.029 | N | 0.159 | 0.285 | 0.119812018005 | gnomAD-2.1.1 | 2.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.28654E-04 | None | 0 | 0 | 0 |
H/Q | rs763935915 | 0.374 | 0.029 | N | 0.159 | 0.285 | 0.119812018005 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
H/Q | rs763935915 | 0.374 | 0.029 | N | 0.159 | 0.285 | 0.119812018005 | gnomAD-4.0.0 | 9.2936E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.64672E-04 | 0 |
H/R | rs753833148 | -0.489 | 0.002 | N | 0.143 | 0.298 | 0.15556083564 | gnomAD-2.1.1 | 2E-05 | None | None | None | None | N | None | 0 | 1.15781E-04 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
H/R | rs753833148 | -0.489 | 0.002 | N | 0.143 | 0.298 | 0.15556083564 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 2.07125E-04 | 0 |
H/R | rs753833148 | -0.489 | 0.002 | N | 0.143 | 0.298 | 0.15556083564 | gnomAD-4.0.0 | 1.3011E-05 | None | None | None | None | N | None | 0 | 1.16667E-04 | None | 0 | 4.45653E-05 | None | 0 | 0 | 2.54235E-06 | 5.48944E-05 | 6.40123E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4884 | ambiguous | 0.493 | ambiguous | 0.376 | Stabilizing | 0.495 | N | 0.233 | neutral | None | None | None | None | N |
H/C | 0.2581 | likely_benign | 0.2567 | benign | 0.98 | Stabilizing | 0.995 | D | 0.228 | neutral | None | None | None | None | N |
H/D | 0.4777 | ambiguous | 0.4802 | ambiguous | 0.038 | Stabilizing | 0.27 | N | 0.269 | neutral | N | 0.507795386 | None | None | N |
H/E | 0.4498 | ambiguous | 0.4398 | ambiguous | 0.074 | Stabilizing | 0.329 | N | 0.199 | neutral | None | None | None | None | N |
H/F | 0.4952 | ambiguous | 0.5148 | ambiguous | 1.091 | Stabilizing | 0.981 | D | 0.282 | neutral | None | None | None | None | N |
H/G | 0.5669 | likely_pathogenic | 0.571 | pathogenic | 0.067 | Stabilizing | 0.329 | N | 0.265 | neutral | None | None | None | None | N |
H/I | 0.5339 | ambiguous | 0.5185 | ambiguous | 1.172 | Stabilizing | 0.981 | D | 0.291 | neutral | None | None | None | None | N |
H/K | 0.2623 | likely_benign | 0.2542 | benign | 0.377 | Stabilizing | 0.329 | N | 0.231 | neutral | None | None | None | None | N |
H/L | 0.2328 | likely_benign | 0.236 | benign | 1.172 | Stabilizing | 0.642 | D | 0.308 | neutral | N | 0.504959425 | None | None | N |
H/M | 0.6409 | likely_pathogenic | 0.6534 | pathogenic | 0.951 | Stabilizing | 0.981 | D | 0.231 | neutral | None | None | None | None | N |
H/N | 0.1886 | likely_benign | 0.1877 | benign | 0.42 | Stabilizing | 0.002 | N | 0.145 | neutral | N | 0.507964228 | None | None | N |
H/P | 0.6305 | likely_pathogenic | 0.5997 | pathogenic | 0.933 | Stabilizing | 0.917 | D | 0.305 | neutral | N | 0.508176519 | None | None | N |
H/Q | 0.2208 | likely_benign | 0.2204 | benign | 0.551 | Stabilizing | 0.029 | N | 0.159 | neutral | N | 0.432118711 | None | None | N |
H/R | 0.1061 | likely_benign | 0.1024 | benign | -0.32 | Destabilizing | 0.002 | N | 0.143 | neutral | N | 0.393151679 | None | None | N |
H/S | 0.4058 | ambiguous | 0.4162 | ambiguous | 0.562 | Stabilizing | 0.329 | N | 0.305 | neutral | None | None | None | None | N |
H/T | 0.4233 | ambiguous | 0.4176 | ambiguous | 0.698 | Stabilizing | 0.704 | D | 0.297 | neutral | None | None | None | None | N |
H/V | 0.4229 | ambiguous | 0.4204 | ambiguous | 0.933 | Stabilizing | 0.828 | D | 0.341 | neutral | None | None | None | None | N |
H/W | 0.6218 | likely_pathogenic | 0.6519 | pathogenic | 1.081 | Stabilizing | 0.995 | D | 0.233 | neutral | None | None | None | None | N |
H/Y | 0.1821 | likely_benign | 0.1833 | benign | 1.368 | Stabilizing | 0.917 | D | 0.277 | neutral | N | 0.499920769 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.