Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28830 | 86713;86714;86715 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
N2AB | 27189 | 81790;81791;81792 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
N2A | 26262 | 79009;79010;79011 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
N2B | 19765 | 59518;59519;59520 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
Novex-1 | 19890 | 59893;59894;59895 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
Novex-2 | 19957 | 60094;60095;60096 | chr2:178559644;178559643;178559642 | chr2:179424371;179424370;179424369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.012 | N | 0.289 | 0.159 | 0.427713192076 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | None | None | None | N | 0.142 | 0.08 | 0.277317399466 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1049 | likely_benign | 0.101 | benign | -0.342 | Destabilizing | 0.012 | N | 0.289 | neutral | N | 0.440415955 | None | None | I |
V/C | 0.5232 | ambiguous | 0.506 | ambiguous | -0.754 | Destabilizing | 0.676 | D | 0.279 | neutral | None | None | None | None | I |
V/D | 0.2117 | likely_benign | 0.2091 | benign | -0.248 | Destabilizing | 0.029 | N | 0.288 | neutral | N | 0.48286001 | None | None | I |
V/E | 0.2043 | likely_benign | 0.2078 | benign | -0.361 | Destabilizing | 0.038 | N | 0.297 | neutral | None | None | None | None | I |
V/F | 0.1297 | likely_benign | 0.1253 | benign | -0.663 | Destabilizing | 0.171 | N | 0.287 | neutral | N | 0.511644122 | None | None | I |
V/G | 0.1302 | likely_benign | 0.1258 | benign | -0.426 | Destabilizing | 0.029 | N | 0.34 | neutral | N | 0.460503226 | None | None | I |
V/H | 0.333 | likely_benign | 0.3287 | benign | -0.022 | Destabilizing | 0.001 | N | 0.38 | neutral | None | None | None | None | I |
V/I | 0.0642 | likely_benign | 0.0622 | benign | -0.266 | Destabilizing | None | N | 0.142 | neutral | N | 0.464524966 | None | None | I |
V/K | 0.2241 | likely_benign | 0.2221 | benign | -0.37 | Destabilizing | 0.038 | N | 0.295 | neutral | None | None | None | None | I |
V/L | 0.126 | likely_benign | 0.1214 | benign | -0.266 | Destabilizing | None | N | 0.128 | neutral | N | 0.479531704 | None | None | I |
V/M | 0.1015 | likely_benign | 0.097 | benign | -0.489 | Destabilizing | 0.007 | N | 0.31 | neutral | None | None | None | None | I |
V/N | 0.125 | likely_benign | 0.1201 | benign | -0.17 | Destabilizing | None | N | 0.322 | neutral | None | None | None | None | I |
V/P | 0.2175 | likely_benign | 0.1999 | benign | -0.261 | Destabilizing | 0.214 | N | 0.317 | neutral | None | None | None | None | I |
V/Q | 0.2048 | likely_benign | 0.2081 | benign | -0.376 | Destabilizing | 0.214 | N | 0.317 | neutral | None | None | None | None | I |
V/R | 0.2046 | likely_benign | 0.2005 | benign | 0.082 | Stabilizing | 0.214 | N | 0.305 | neutral | None | None | None | None | I |
V/S | 0.1081 | likely_benign | 0.1061 | benign | -0.499 | Destabilizing | None | N | 0.301 | neutral | None | None | None | None | I |
V/T | 0.1096 | likely_benign | 0.1088 | benign | -0.514 | Destabilizing | 0.016 | N | 0.241 | neutral | None | None | None | None | I |
V/W | 0.7021 | likely_pathogenic | 0.6763 | pathogenic | -0.733 | Destabilizing | 0.864 | D | 0.281 | neutral | None | None | None | None | I |
V/Y | 0.3682 | ambiguous | 0.3461 | ambiguous | -0.445 | Destabilizing | 0.214 | N | 0.285 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.