Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28831 | 86716;86717;86718 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
N2AB | 27190 | 81793;81794;81795 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
N2A | 26263 | 79012;79013;79014 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
N2B | 19766 | 59521;59522;59523 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
Novex-1 | 19891 | 59896;59897;59898 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
Novex-2 | 19958 | 60097;60098;60099 | chr2:178559641;178559640;178559639 | chr2:179424368;179424367;179424366 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs755136760 | -0.696 | 0.884 | N | 0.452 | 0.188 | 0.554957464841 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1826 | likely_benign | 0.172 | benign | -0.452 | Destabilizing | 0.016 | N | 0.338 | neutral | None | None | None | None | I |
L/C | 0.3613 | ambiguous | 0.3388 | benign | -0.844 | Destabilizing | 0.996 | D | 0.564 | neutral | None | None | None | None | I |
L/D | 0.5993 | likely_pathogenic | 0.5461 | ambiguous | -0.145 | Destabilizing | 0.91 | D | 0.559 | neutral | None | None | None | None | I |
L/E | 0.3712 | ambiguous | 0.3288 | benign | -0.236 | Destabilizing | 0.742 | D | 0.531 | neutral | None | None | None | None | I |
L/F | 0.1208 | likely_benign | 0.1023 | benign | -0.646 | Destabilizing | 0.884 | D | 0.452 | neutral | N | 0.456329557 | None | None | I |
L/G | 0.4082 | ambiguous | 0.3754 | ambiguous | -0.536 | Destabilizing | 0.59 | D | 0.519 | neutral | None | None | None | None | I |
L/H | 0.187 | likely_benign | 0.1661 | benign | 0.037 | Stabilizing | 0.996 | D | 0.568 | neutral | None | None | None | None | I |
L/I | 0.0817 | likely_benign | 0.0798 | benign | -0.349 | Destabilizing | 0.009 | N | 0.305 | neutral | None | None | None | None | I |
L/K | 0.2371 | likely_benign | 0.2114 | benign | -0.327 | Destabilizing | 0.742 | D | 0.533 | neutral | None | None | None | None | I |
L/M | 0.1169 | likely_benign | 0.1111 | benign | -0.608 | Destabilizing | 0.884 | D | 0.451 | neutral | N | 0.488788692 | None | None | I |
L/N | 0.2684 | likely_benign | 0.2499 | benign | -0.202 | Destabilizing | 0.91 | D | 0.564 | neutral | None | None | None | None | I |
L/P | 0.5919 | likely_pathogenic | 0.5347 | ambiguous | -0.357 | Destabilizing | 0.953 | D | 0.566 | neutral | None | None | None | None | I |
L/Q | 0.1362 | likely_benign | 0.1253 | benign | -0.358 | Destabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | I |
L/R | 0.166 | likely_benign | 0.1467 | benign | 0.091 | Stabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | I |
L/S | 0.1897 | likely_benign | 0.1768 | benign | -0.596 | Destabilizing | 0.028 | N | 0.505 | neutral | N | 0.419600753 | None | None | I |
L/T | 0.1793 | likely_benign | 0.1715 | benign | -0.588 | Destabilizing | 0.59 | D | 0.453 | neutral | None | None | None | None | I |
L/V | 0.0809 | likely_benign | 0.0779 | benign | -0.357 | Destabilizing | 0.003 | N | 0.268 | neutral | N | 0.433124623 | None | None | I |
L/W | 0.2917 | likely_benign | 0.2462 | benign | -0.664 | Destabilizing | 0.994 | D | 0.605 | neutral | N | 0.51426314 | None | None | I |
L/Y | 0.3121 | likely_benign | 0.257 | benign | -0.436 | Destabilizing | 0.953 | D | 0.547 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.