Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28833 | 86722;86723;86724 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
N2AB | 27192 | 81799;81800;81801 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
N2A | 26265 | 79018;79019;79020 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
N2B | 19768 | 59527;59528;59529 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
Novex-1 | 19893 | 59902;59903;59904 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
Novex-2 | 19960 | 60103;60104;60105 | chr2:178559635;178559634;178559633 | chr2:179424362;179424361;179424360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.166 | N | 0.353 | 0.165 | 0.284539287134 | gnomAD-4.0.0 | 6.84236E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15961E-05 | 0 |
A/S | rs368023553 | -0.082 | 0.005 | N | 0.167 | 0.084 | None | gnomAD-2.1.1 | 5.36E-05 | None | None | None | None | I | None | 6.20091E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/S | rs368023553 | -0.082 | 0.005 | N | 0.167 | 0.084 | None | gnomAD-3.1.2 | 1.57712E-04 | None | None | None | None | I | None | 5.54778E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | rs368023553 | -0.082 | 0.005 | N | 0.167 | 0.084 | None | gnomAD-4.0.0 | 2.60281E-05 | None | None | None | None | I | None | 5.205E-04 | 1.66722E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20246E-05 |
A/T | rs368023553 | -0.143 | 0.002 | N | 0.165 | 0.093 | 0.152612264143 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/T | rs368023553 | -0.143 | 0.002 | N | 0.165 | 0.093 | 0.152612264143 | gnomAD-4.0.0 | 6.84245E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99499E-07 | 0 | 0 |
A/V | rs374108922 | 0.007 | 0.166 | N | 0.307 | 0.155 | None | gnomAD-2.1.1 | 5.36E-05 | None | None | None | None | I | None | 6.20091E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs374108922 | 0.007 | 0.166 | N | 0.307 | 0.155 | None | gnomAD-3.1.2 | 1.57698E-04 | None | None | None | None | I | None | 5.54778E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs374108922 | 0.007 | 0.166 | N | 0.307 | 0.155 | None | gnomAD-4.0.0 | 2.60276E-05 | None | None | None | None | I | None | 5.20486E-04 | 1.66683E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20225E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.348 | ambiguous | 0.3505 | ambiguous | -0.684 | Destabilizing | 0.965 | D | 0.419 | neutral | None | None | None | None | I |
A/D | 0.2473 | likely_benign | 0.2315 | benign | -0.418 | Destabilizing | 0.491 | N | 0.576 | neutral | N | 0.46046594 | None | None | I |
A/E | 0.1961 | likely_benign | 0.1852 | benign | -0.582 | Destabilizing | 0.561 | D | 0.455 | neutral | None | None | None | None | I |
A/F | 0.2682 | likely_benign | 0.2712 | benign | -0.903 | Destabilizing | 0.901 | D | 0.62 | neutral | None | None | None | None | I |
A/G | 0.1385 | likely_benign | 0.135 | benign | -0.175 | Destabilizing | 0.166 | N | 0.353 | neutral | N | 0.485497671 | None | None | I |
A/H | 0.3303 | likely_benign | 0.3238 | benign | -0.291 | Destabilizing | 0.901 | D | 0.591 | neutral | None | None | None | None | I |
A/I | 0.1646 | likely_benign | 0.1676 | benign | -0.315 | Destabilizing | 0.561 | D | 0.491 | neutral | None | None | None | None | I |
A/K | 0.2823 | likely_benign | 0.2744 | benign | -0.432 | Destabilizing | 0.209 | N | 0.453 | neutral | None | None | None | None | I |
A/L | 0.1457 | likely_benign | 0.1469 | benign | -0.315 | Destabilizing | 0.209 | N | 0.45 | neutral | None | None | None | None | I |
A/M | 0.1485 | likely_benign | 0.1512 | benign | -0.332 | Destabilizing | 0.965 | D | 0.485 | neutral | None | None | None | None | I |
A/N | 0.1679 | likely_benign | 0.1683 | benign | -0.126 | Destabilizing | 0.561 | D | 0.583 | neutral | None | None | None | None | I |
A/P | 0.3099 | likely_benign | 0.2713 | benign | -0.233 | Destabilizing | 0.662 | D | 0.495 | neutral | N | 0.475070033 | None | None | I |
A/Q | 0.249 | likely_benign | 0.244 | benign | -0.421 | Destabilizing | 0.818 | D | 0.496 | neutral | None | None | None | None | I |
A/R | 0.2888 | likely_benign | 0.2803 | benign | -0.009 | Destabilizing | 0.004 | N | 0.311 | neutral | None | None | None | None | I |
A/S | 0.079 | likely_benign | 0.0793 | benign | -0.29 | Destabilizing | 0.005 | N | 0.167 | neutral | N | 0.35429848 | None | None | I |
A/T | 0.0613 | likely_benign | 0.0633 | benign | -0.381 | Destabilizing | 0.002 | N | 0.165 | neutral | N | 0.362072602 | None | None | I |
A/V | 0.097 | likely_benign | 0.0989 | benign | -0.233 | Destabilizing | 0.166 | N | 0.307 | neutral | N | 0.451827814 | None | None | I |
A/W | 0.6622 | likely_pathogenic | 0.6521 | pathogenic | -1.032 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | I |
A/Y | 0.3641 | ambiguous | 0.3559 | ambiguous | -0.672 | Destabilizing | 0.965 | D | 0.611 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.