Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28840 | 86743;86744;86745 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
N2AB | 27199 | 81820;81821;81822 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
N2A | 26272 | 79039;79040;79041 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
N2B | 19775 | 59548;59549;59550 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
Novex-1 | 19900 | 59923;59924;59925 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
Novex-2 | 19967 | 60124;60125;60126 | chr2:178559614;178559613;178559612 | chr2:179424341;179424340;179424339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs920125248 | -1.611 | 0.999 | N | 0.613 | 0.462 | 0.634904748024 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/A | rs920125248 | -1.611 | 0.999 | N | 0.613 | 0.462 | 0.634904748024 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs920125248 | -1.611 | 0.999 | N | 0.613 | 0.462 | 0.634904748024 | gnomAD-4.0.0 | 1.05347E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44094E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8655 | likely_pathogenic | 0.8511 | pathogenic | -2.018 | Highly Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.506328938 | None | None | N |
V/C | 0.9554 | likely_pathogenic | 0.9541 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -2.823 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.518192223 | None | None | N |
V/E | 0.9962 | likely_pathogenic | 0.996 | pathogenic | -2.537 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/F | 0.8931 | likely_pathogenic | 0.869 | pathogenic | -1.167 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.516924775 | None | None | N |
V/G | 0.9316 | likely_pathogenic | 0.9302 | pathogenic | -2.623 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.518192223 | None | None | N |
V/H | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -2.566 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/I | 0.1332 | likely_benign | 0.1246 | benign | -0.291 | Destabilizing | 0.997 | D | 0.557 | neutral | N | 0.455442306 | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9963 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/L | 0.6883 | likely_pathogenic | 0.6599 | pathogenic | -0.291 | Destabilizing | 0.997 | D | 0.637 | neutral | N | 0.500694678 | None | None | N |
V/M | 0.7812 | likely_pathogenic | 0.7491 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/N | 0.9945 | likely_pathogenic | 0.9939 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.995 | likely_pathogenic | 0.9945 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/Q | 0.9946 | likely_pathogenic | 0.9941 | pathogenic | -1.86 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/R | 0.9938 | likely_pathogenic | 0.9935 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.9703 | likely_pathogenic | 0.9659 | pathogenic | -2.752 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/T | 0.8886 | likely_pathogenic | 0.8778 | pathogenic | -2.302 | Highly Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.9947 | likely_pathogenic | 0.9936 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.