Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28841 | 86746;86747;86748 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
N2AB | 27200 | 81823;81824;81825 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
N2A | 26273 | 79042;79043;79044 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
N2B | 19776 | 59551;59552;59553 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
Novex-1 | 19901 | 59926;59927;59928 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
Novex-2 | 19968 | 60127;60128;60129 | chr2:178559611;178559610;178559609 | chr2:179424338;179424337;179424336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs879227926 | None | 0.998 | D | 0.629 | 0.338 | 0.218845423259 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76735E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9231 | likely_pathogenic | 0.919 | pathogenic | -0.446 | Destabilizing | 0.996 | D | 0.612 | neutral | None | None | None | None | N |
K/C | 0.9475 | likely_pathogenic | 0.9477 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/D | 0.9525 | likely_pathogenic | 0.9498 | pathogenic | 0.137 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/E | 0.7903 | likely_pathogenic | 0.7676 | pathogenic | 0.252 | Stabilizing | 0.989 | D | 0.559 | neutral | D | 0.525285423 | None | None | N |
K/F | 0.9847 | likely_pathogenic | 0.9845 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/G | 0.9636 | likely_pathogenic | 0.9619 | pathogenic | -0.801 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
K/H | 0.6184 | likely_pathogenic | 0.5899 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
K/I | 0.8956 | likely_pathogenic | 0.8933 | pathogenic | 0.467 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.513647064 | None | None | N |
K/L | 0.8556 | likely_pathogenic | 0.8513 | pathogenic | 0.467 | Stabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
K/M | 0.7541 | likely_pathogenic | 0.747 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/N | 0.8957 | likely_pathogenic | 0.8868 | pathogenic | -0.397 | Destabilizing | 0.998 | D | 0.629 | neutral | D | 0.52218919 | None | None | N |
K/P | 0.9948 | likely_pathogenic | 0.9951 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/Q | 0.4703 | ambiguous | 0.4408 | ambiguous | -0.411 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.483072664 | None | None | N |
K/R | 0.1129 | likely_benign | 0.1088 | benign | -0.473 | Destabilizing | 0.217 | N | 0.279 | neutral | N | 0.454657476 | None | None | N |
K/S | 0.9178 | likely_pathogenic | 0.9102 | pathogenic | -1.056 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
K/T | 0.7032 | likely_pathogenic | 0.6842 | pathogenic | -0.732 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.508699817 | None | None | N |
K/V | 0.8531 | likely_pathogenic | 0.8499 | pathogenic | 0.193 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/W | 0.9631 | likely_pathogenic | 0.9641 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.942 | likely_pathogenic | 0.939 | pathogenic | 0.256 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.