Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28850 | 86773;86774;86775 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
N2AB | 27209 | 81850;81851;81852 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
N2A | 26282 | 79069;79070;79071 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
N2B | 19785 | 59578;59579;59580 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
Novex-1 | 19910 | 59953;59954;59955 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
Novex-2 | 19977 | 60154;60155;60156 | chr2:178559584;178559583;178559582 | chr2:179424311;179424310;179424309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs377049333 | None | 0.007 | N | 0.275 | 0.105 | None | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.052 | likely_benign | 0.0512 | benign | -0.657 | Destabilizing | None | N | 0.057 | neutral | N | 0.421512402 | None | None | N |
T/C | 0.1609 | likely_benign | 0.1606 | benign | -0.362 | Destabilizing | 0.245 | N | 0.398 | neutral | None | None | None | None | N |
T/D | 0.2386 | likely_benign | 0.2184 | benign | -0.545 | Destabilizing | 0.018 | N | 0.39 | neutral | None | None | None | None | N |
T/E | 0.1777 | likely_benign | 0.1589 | benign | -0.536 | Destabilizing | 0.018 | N | 0.457 | neutral | None | None | None | None | N |
T/F | 0.1496 | likely_benign | 0.1405 | benign | -0.627 | Destabilizing | 0.085 | N | 0.513 | neutral | None | None | None | None | N |
T/G | 0.0898 | likely_benign | 0.0884 | benign | -0.94 | Destabilizing | None | N | 0.203 | neutral | None | None | None | None | N |
T/H | 0.1573 | likely_benign | 0.1463 | benign | -1.309 | Destabilizing | 0.245 | N | 0.463 | neutral | None | None | None | None | N |
T/I | 0.0863 | likely_benign | 0.0828 | benign | 0.009 | Stabilizing | 0.007 | N | 0.402 | neutral | N | 0.499493183 | None | None | N |
T/K | 0.1178 | likely_benign | 0.1038 | benign | -0.889 | Destabilizing | 0.009 | N | 0.429 | neutral | None | None | None | None | N |
T/L | 0.0627 | likely_benign | 0.0618 | benign | 0.009 | Stabilizing | 0.004 | N | 0.311 | neutral | None | None | None | None | N |
T/M | 0.0734 | likely_benign | 0.073 | benign | 0.301 | Stabilizing | 0.245 | N | 0.399 | neutral | None | None | None | None | N |
T/N | 0.0817 | likely_benign | 0.0828 | benign | -0.812 | Destabilizing | 0.007 | N | 0.275 | neutral | N | 0.517385511 | None | None | N |
T/P | 0.1793 | likely_benign | 0.1631 | benign | -0.18 | Destabilizing | 0.033 | N | 0.434 | neutral | N | 0.487756037 | None | None | N |
T/Q | 0.1285 | likely_benign | 0.1187 | benign | -0.936 | Destabilizing | 0.044 | N | 0.46 | neutral | None | None | None | None | N |
T/R | 0.1093 | likely_benign | 0.0932 | benign | -0.692 | Destabilizing | 0.044 | N | 0.439 | neutral | None | None | None | None | N |
T/S | 0.0701 | likely_benign | 0.0696 | benign | -0.998 | Destabilizing | None | N | 0.055 | neutral | N | 0.436652426 | None | None | N |
T/V | 0.0722 | likely_benign | 0.0687 | benign | -0.18 | Destabilizing | None | N | 0.06 | neutral | None | None | None | None | N |
T/W | 0.4114 | ambiguous | 0.3739 | ambiguous | -0.636 | Destabilizing | 0.788 | D | 0.44 | neutral | None | None | None | None | N |
T/Y | 0.1678 | likely_benign | 0.1592 | benign | -0.408 | Destabilizing | 0.085 | N | 0.508 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.