Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28859 | 86800;86801;86802 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
N2AB | 27218 | 81877;81878;81879 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
N2A | 26291 | 79096;79097;79098 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
N2B | 19794 | 59605;59606;59607 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
Novex-1 | 19919 | 59980;59981;59982 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
Novex-2 | 19986 | 60181;60182;60183 | chr2:178559557;178559556;178559555 | chr2:179424284;179424283;179424282 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1165101738 | -0.189 | 0.675 | N | 0.473 | 0.165 | 0.255270683199 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/E | rs1165101738 | -0.189 | 0.675 | N | 0.473 | 0.165 | 0.255270683199 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99483E-07 | 1.15945E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4867 | ambiguous | 0.51 | ambiguous | -0.256 | Destabilizing | 0.901 | D | 0.533 | neutral | None | None | None | None | N |
K/C | 0.7742 | likely_pathogenic | 0.7781 | pathogenic | -0.347 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
K/D | 0.8492 | likely_pathogenic | 0.8649 | pathogenic | -0.045 | Destabilizing | 0.97 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/E | 0.3993 | ambiguous | 0.42 | ambiguous | -0.028 | Destabilizing | 0.675 | D | 0.473 | neutral | N | 0.493908431 | None | None | N |
K/F | 0.9218 | likely_pathogenic | 0.9255 | pathogenic | -0.442 | Destabilizing | 0.997 | D | 0.795 | deleterious | None | None | None | None | N |
K/G | 0.5588 | ambiguous | 0.5703 | pathogenic | -0.497 | Destabilizing | 0.97 | D | 0.661 | neutral | None | None | None | None | N |
K/H | 0.5042 | ambiguous | 0.5098 | ambiguous | -0.915 | Destabilizing | 0.99 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/I | 0.6737 | likely_pathogenic | 0.7098 | pathogenic | 0.311 | Stabilizing | 0.591 | D | 0.805 | deleterious | N | 0.491385597 | None | None | N |
K/L | 0.579 | likely_pathogenic | 0.5989 | pathogenic | 0.311 | Stabilizing | 0.485 | N | 0.661 | neutral | None | None | None | None | N |
K/M | 0.4504 | ambiguous | 0.4719 | ambiguous | 0.361 | Stabilizing | 0.989 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/N | 0.719 | likely_pathogenic | 0.749 | pathogenic | 0.067 | Stabilizing | 0.96 | D | 0.664 | neutral | N | 0.50866724 | None | None | N |
K/P | 0.7983 | likely_pathogenic | 0.8233 | pathogenic | 0.151 | Stabilizing | 0.985 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/Q | 0.2236 | likely_benign | 0.2326 | benign | -0.217 | Destabilizing | 0.746 | D | 0.668 | neutral | N | 0.519326951 | None | None | N |
K/R | 0.0697 | likely_benign | 0.0707 | benign | -0.14 | Destabilizing | 0.004 | N | 0.191 | neutral | N | 0.455488903 | None | None | N |
K/S | 0.6117 | likely_pathogenic | 0.6389 | pathogenic | -0.535 | Destabilizing | 0.901 | D | 0.578 | neutral | None | None | None | None | N |
K/T | 0.4015 | ambiguous | 0.4399 | ambiguous | -0.357 | Destabilizing | 0.879 | D | 0.655 | neutral | N | 0.515515854 | None | None | N |
K/V | 0.5653 | likely_pathogenic | 0.599 | pathogenic | 0.151 | Stabilizing | 0.554 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/W | 0.8521 | likely_pathogenic | 0.8547 | pathogenic | -0.335 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
K/Y | 0.8249 | likely_pathogenic | 0.8294 | pathogenic | 0.017 | Stabilizing | 0.902 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.