Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28860 | 86803;86804;86805 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
N2AB | 27219 | 81880;81881;81882 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
N2A | 26292 | 79099;79100;79101 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
N2B | 19795 | 59608;59609;59610 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
Novex-1 | 19920 | 59983;59984;59985 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
Novex-2 | 19987 | 60184;60185;60186 | chr2:178559554;178559553;178559552 | chr2:179424281;179424280;179424279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.004 | N | 0.076 | 0.03 | 0.0884992946249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1358 | likely_benign | 0.1276 | benign | -0.595 | Destabilizing | 0.201 | N | 0.348 | neutral | N | 0.452795314 | None | None | N |
E/C | 0.7277 | likely_pathogenic | 0.7195 | pathogenic | 0.027 | Stabilizing | 0.992 | D | 0.29 | neutral | None | None | None | None | N |
E/D | 0.07 | likely_benign | 0.0714 | benign | -0.659 | Destabilizing | 0.004 | N | 0.076 | neutral | N | 0.393784296 | None | None | N |
E/F | 0.6275 | likely_pathogenic | 0.5949 | pathogenic | -0.651 | Destabilizing | 0.972 | D | 0.324 | neutral | None | None | None | None | N |
E/G | 0.1234 | likely_benign | 0.114 | benign | -0.834 | Destabilizing | 0.334 | N | 0.3 | neutral | N | 0.423627201 | None | None | N |
E/H | 0.4158 | ambiguous | 0.3877 | ambiguous | -0.847 | Destabilizing | 0.92 | D | 0.332 | neutral | None | None | None | None | N |
E/I | 0.356 | ambiguous | 0.3309 | benign | 0.017 | Stabilizing | 0.85 | D | 0.373 | neutral | None | None | None | None | N |
E/K | 0.2342 | likely_benign | 0.2027 | benign | 0.078 | Stabilizing | 0.334 | N | 0.316 | neutral | N | 0.446618703 | None | None | N |
E/L | 0.3804 | ambiguous | 0.3558 | ambiguous | 0.017 | Stabilizing | 0.617 | D | 0.399 | neutral | None | None | None | None | N |
E/M | 0.4032 | ambiguous | 0.3846 | ambiguous | 0.442 | Stabilizing | 0.992 | D | 0.285 | neutral | None | None | None | None | N |
E/N | 0.1419 | likely_benign | 0.1389 | benign | -0.179 | Destabilizing | 0.021 | N | 0.099 | neutral | None | None | None | None | N |
E/P | 0.88 | likely_pathogenic | 0.8705 | pathogenic | -0.166 | Destabilizing | 0.92 | D | 0.396 | neutral | None | None | None | None | N |
E/Q | 0.1598 | likely_benign | 0.1467 | benign | -0.159 | Destabilizing | 0.712 | D | 0.383 | neutral | N | 0.465993898 | None | None | N |
E/R | 0.3665 | ambiguous | 0.3172 | benign | 0.104 | Stabilizing | 0.766 | D | 0.352 | neutral | None | None | None | None | N |
E/S | 0.1344 | likely_benign | 0.1343 | benign | -0.388 | Destabilizing | 0.026 | N | 0.063 | neutral | None | None | None | None | N |
E/T | 0.1359 | likely_benign | 0.1338 | benign | -0.194 | Destabilizing | 0.021 | N | 0.152 | neutral | None | None | None | None | N |
E/V | 0.2165 | likely_benign | 0.2031 | benign | -0.166 | Destabilizing | 0.549 | D | 0.399 | neutral | N | 0.492564424 | None | None | N |
E/W | 0.8506 | likely_pathogenic | 0.8355 | pathogenic | -0.542 | Destabilizing | 0.992 | D | 0.445 | neutral | None | None | None | None | N |
E/Y | 0.46 | ambiguous | 0.4329 | ambiguous | -0.414 | Destabilizing | 0.972 | D | 0.313 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.