Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28876 | 86851;86852;86853 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
N2AB | 27235 | 81928;81929;81930 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
N2A | 26308 | 79147;79148;79149 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
N2B | 19811 | 59656;59657;59658 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
Novex-1 | 19936 | 60031;60032;60033 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
Novex-2 | 20003 | 60232;60233;60234 | chr2:178559506;178559505;178559504 | chr2:179424233;179424232;179424231 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs987601709 | None | None | N | 0.365 | 0.227 | 0.415947407303 | gnomAD-4.0.0 | 6.8424E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 0 | 0 |
P/S | rs1322696753 | -0.201 | 0.062 | N | 0.412 | 0.205 | 0.18274738541 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/S | rs1322696753 | -0.201 | 0.062 | N | 0.412 | 0.205 | 0.18274738541 | gnomAD-4.0.0 | 6.36568E-06 | None | None | None | None | I | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29873E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0749 | likely_benign | 0.0556 | benign | -0.761 | Destabilizing | None | N | 0.14 | neutral | D | 0.525447633 | None | None | I |
P/C | 0.5737 | likely_pathogenic | 0.4829 | ambiguous | -0.551 | Destabilizing | 0.824 | D | 0.494 | neutral | None | None | None | None | I |
P/D | 0.6734 | likely_pathogenic | 0.5466 | ambiguous | -0.658 | Destabilizing | 0.38 | N | 0.427 | neutral | None | None | None | None | I |
P/E | 0.4485 | ambiguous | 0.3361 | benign | -0.778 | Destabilizing | 0.081 | N | 0.393 | neutral | None | None | None | None | I |
P/F | 0.5606 | ambiguous | 0.4482 | ambiguous | -0.993 | Destabilizing | 0.235 | N | 0.505 | neutral | None | None | None | None | I |
P/G | 0.4143 | ambiguous | 0.3216 | benign | -0.916 | Destabilizing | 0.081 | N | 0.45 | neutral | None | None | None | None | I |
P/H | 0.2792 | likely_benign | 0.2278 | benign | -0.498 | Destabilizing | 0.698 | D | 0.479 | neutral | None | None | None | None | I |
P/I | 0.2794 | likely_benign | 0.1957 | benign | -0.497 | Destabilizing | 0.235 | N | 0.485 | neutral | None | None | None | None | I |
P/K | 0.433 | ambiguous | 0.3236 | benign | -0.607 | Destabilizing | 0.081 | N | 0.405 | neutral | None | None | None | None | I |
P/L | 0.1182 | likely_benign | 0.0933 | benign | -0.497 | Destabilizing | None | N | 0.365 | neutral | N | 0.493631004 | None | None | I |
P/M | 0.2721 | likely_benign | 0.2051 | benign | -0.305 | Destabilizing | 0.38 | N | 0.484 | neutral | None | None | None | None | I |
P/N | 0.4178 | ambiguous | 0.3198 | benign | -0.267 | Destabilizing | 0.38 | N | 0.503 | neutral | None | None | None | None | I |
P/Q | 0.1994 | likely_benign | 0.1512 | benign | -0.575 | Destabilizing | 0.004 | N | 0.319 | neutral | N | 0.484703781 | None | None | I |
P/R | 0.2904 | likely_benign | 0.2211 | benign | -0.002 | Destabilizing | 0.001 | N | 0.359 | neutral | N | 0.477399627 | None | None | I |
P/S | 0.1646 | likely_benign | 0.1211 | benign | -0.62 | Destabilizing | 0.062 | N | 0.412 | neutral | N | 0.485842643 | None | None | I |
P/T | 0.1211 | likely_benign | 0.087 | benign | -0.645 | Destabilizing | 0.062 | N | 0.451 | neutral | N | 0.491856577 | None | None | I |
P/V | 0.1696 | likely_benign | 0.1209 | benign | -0.549 | Destabilizing | 0.081 | N | 0.447 | neutral | None | None | None | None | I |
P/W | 0.7638 | likely_pathogenic | 0.6656 | pathogenic | -1.058 | Destabilizing | 0.935 | D | 0.609 | neutral | None | None | None | None | I |
P/Y | 0.5638 | ambiguous | 0.4549 | ambiguous | -0.768 | Destabilizing | 0.555 | D | 0.507 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.