Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28879 | 86860;86861;86862 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
N2AB | 27238 | 81937;81938;81939 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
N2A | 26311 | 79156;79157;79158 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
N2B | 19814 | 59665;59666;59667 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
Novex-1 | 19939 | 60040;60041;60042 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
Novex-2 | 20006 | 60241;60242;60243 | chr2:178559497;178559496;178559495 | chr2:179424224;179424223;179424222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1114167328 | None | 0.156 | N | 0.423 | 0.112 | 0.101711395817 | gnomAD-4.0.0 | 6.84239E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65662E-05 |
N/S | None | None | 0.706 | N | 0.573 | 0.135 | 0.117506650769 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3626 | ambiguous | 0.4699 | ambiguous | -0.422 | Destabilizing | 0.504 | D | 0.692 | prob.neutral | None | None | None | None | N |
N/C | 0.2513 | likely_benign | 0.332 | benign | 0.035 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
N/D | 0.4447 | ambiguous | 0.5509 | ambiguous | -1.63 | Destabilizing | 0.826 | D | 0.596 | neutral | N | 0.520577744 | None | None | N |
N/E | 0.7385 | likely_pathogenic | 0.8459 | pathogenic | -1.483 | Destabilizing | 0.913 | D | 0.601 | neutral | None | None | None | None | N |
N/F | 0.5305 | ambiguous | 0.6277 | pathogenic | -0.193 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
N/G | 0.3228 | likely_benign | 0.3796 | ambiguous | -0.78 | Destabilizing | 0.981 | D | 0.586 | neutral | None | None | None | None | N |
N/H | 0.116 | likely_benign | 0.1523 | benign | -0.708 | Destabilizing | 0.138 | N | 0.42 | neutral | N | 0.484753017 | None | None | N |
N/I | 0.4693 | ambiguous | 0.64 | pathogenic | 0.494 | Stabilizing | 0.987 | D | 0.824 | deleterious | N | 0.483903632 | None | None | N |
N/K | 0.471 | ambiguous | 0.678 | pathogenic | -0.217 | Destabilizing | 0.156 | N | 0.423 | neutral | N | 0.497911529 | None | None | N |
N/L | 0.44 | ambiguous | 0.5795 | pathogenic | 0.494 | Stabilizing | 0.967 | D | 0.78 | deleterious | None | None | None | None | N |
N/M | 0.438 | ambiguous | 0.5975 | pathogenic | 0.909 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/P | 0.9872 | likely_pathogenic | 0.991 | pathogenic | 0.22 | Stabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
N/Q | 0.4454 | ambiguous | 0.5965 | pathogenic | -0.933 | Destabilizing | 0.99 | D | 0.647 | neutral | None | None | None | None | N |
N/R | 0.4866 | ambiguous | 0.6399 | pathogenic | -0.371 | Destabilizing | 0.975 | D | 0.622 | neutral | None | None | None | None | N |
N/S | 0.1304 | likely_benign | 0.157 | benign | -0.901 | Destabilizing | 0.706 | D | 0.573 | neutral | N | 0.47878705 | None | None | N |
N/T | 0.249 | likely_benign | 0.3549 | ambiguous | -0.587 | Destabilizing | 0.089 | N | 0.419 | neutral | N | 0.466506939 | None | None | N |
N/V | 0.4631 | ambiguous | 0.6229 | pathogenic | 0.22 | Stabilizing | 0.896 | D | 0.783 | deleterious | None | None | None | None | N |
N/W | 0.8203 | likely_pathogenic | 0.8761 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
N/Y | 0.1614 | likely_benign | 0.2 | benign | 0.187 | Stabilizing | 0.99 | D | 0.769 | deleterious | N | 0.504858931 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.