Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28880 | 86863;86864;86865 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
N2AB | 27239 | 81940;81941;81942 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
N2A | 26312 | 79159;79160;79161 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
N2B | 19815 | 59668;59669;59670 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
Novex-1 | 19940 | 60043;60044;60045 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
Novex-2 | 20007 | 60244;60245;60246 | chr2:178559494;178559493;178559492 | chr2:179424221;179424220;179424219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1244106142 | -4.088 | 0.999 | D | 0.881 | 0.831 | 0.912682040746 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/D | rs1244106142 | -4.088 | 0.999 | D | 0.881 | 0.831 | 0.912682040746 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/D | rs1244106142 | -4.088 | 0.999 | D | 0.881 | 0.831 | 0.912682040746 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9961 | likely_pathogenic | 0.996 | pathogenic | -3.453 | Highly Destabilizing | 0.988 | D | 0.798 | deleterious | None | None | None | None | N |
Y/C | 0.9137 | likely_pathogenic | 0.9002 | pathogenic | -2.051 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.636082486 | None | None | N |
Y/D | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -3.838 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | D | 0.636486095 | None | None | N |
Y/E | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -3.621 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
Y/F | 0.2348 | likely_benign | 0.2009 | benign | -1.371 | Destabilizing | 0.884 | D | 0.624 | neutral | D | 0.551313823 | None | None | N |
Y/G | 0.9898 | likely_pathogenic | 0.9906 | pathogenic | -3.873 | Highly Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
Y/H | 0.97 | likely_pathogenic | 0.9689 | pathogenic | -2.552 | Highly Destabilizing | 0.998 | D | 0.69 | prob.neutral | D | 0.636082486 | None | None | N |
Y/I | 0.9586 | likely_pathogenic | 0.9573 | pathogenic | -2.036 | Highly Destabilizing | 0.023 | N | 0.582 | neutral | None | None | None | None | N |
Y/K | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -2.451 | Highly Destabilizing | 0.986 | D | 0.851 | deleterious | None | None | None | None | N |
Y/L | 0.9317 | likely_pathogenic | 0.927 | pathogenic | -2.036 | Highly Destabilizing | 0.189 | N | 0.71 | prob.delet. | None | None | None | None | N |
Y/M | 0.9844 | likely_pathogenic | 0.9839 | pathogenic | -1.801 | Destabilizing | 0.997 | D | 0.756 | deleterious | None | None | None | None | N |
Y/N | 0.9753 | likely_pathogenic | 0.9786 | pathogenic | -3.275 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.636486095 | None | None | N |
Y/P | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.528 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
Y/Q | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -3.008 | Highly Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
Y/R | 0.9929 | likely_pathogenic | 0.993 | pathogenic | -2.209 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
Y/S | 0.9835 | likely_pathogenic | 0.9834 | pathogenic | -3.601 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | D | 0.636486095 | None | None | N |
Y/T | 0.9935 | likely_pathogenic | 0.9933 | pathogenic | -3.261 | Highly Destabilizing | 0.997 | D | 0.829 | deleterious | None | None | None | None | N |
Y/V | 0.9461 | likely_pathogenic | 0.9451 | pathogenic | -2.528 | Highly Destabilizing | 0.936 | D | 0.716 | prob.delet. | None | None | None | None | N |
Y/W | 0.8505 | likely_pathogenic | 0.819 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.